Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.09■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.09■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.09■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trbv12-1A0A0B4J1H0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.04■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trbv12-1A0A0B4J1H0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Particl-201ENSMUST00000205370 1560 ntBASIC21■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.98■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.98■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv12-1A0A0B4J1H0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv12-1A0A0B4J1H0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv12-1A0A0B4J1H0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.89■□□□□ 0.93
Trbv12-1A0A0B4J1H0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trbv12-1A0A0B4J1H0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.87■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
Trbv12-1A0A0B4J1H0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.84■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trbv12-1A0A0B4J1H0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trbv12-1A0A0B4J1H0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv12-1A0A0B4J1H0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.82■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Gm7432-201ENSMUST00000210343 879 ntBASIC20.82■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv12-1A0A0B4J1H0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv12-1A0A0B4J1H0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.77■□□□□ 0.92
Trbv12-1A0A0B4J1H0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms