Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28870A0A0A6YW38 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28870A0A0A6YW38 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm28870A0A0A6YW38 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28870A0A0A6YW38 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28870A0A0A6YW38 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28870A0A0A6YW38 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28870A0A0A6YW38 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm28870A0A0A6YW38 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28870A0A0A6YW38 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28870A0A0A6YW38 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28870A0A0A6YW38 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.15■□□□□ 0.82
Gm28870A0A0A6YW38 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm28870A0A0A6YW38 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28870A0A0A6YW38 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm28870A0A0A6YW38 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm28870A0A0A6YW38 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28870A0A0A6YW38 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28870A0A0A6YW38 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28870A0A0A6YW38 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28870A0A0A6YW38 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28870A0A0A6YW38 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28870A0A0A6YW38 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28870A0A0A6YW38 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28870A0A0A6YW38 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28870A0A0A6YW38 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm28870A0A0A6YW38 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28870A0A0A6YW38 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28870A0A0A6YW38 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28870A0A0A6YW38 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28870A0A0A6YW38 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Gm28870A0A0A6YW38 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Gm28870A0A0A6YW38 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28870A0A0A6YW38 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28870A0A0A6YW38 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28870A0A0A6YW38 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28870A0A0A6YW38 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28870A0A0A6YW38 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28870A0A0A6YW38 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28870A0A0A6YW38 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm28870A0A0A6YW38 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28870A0A0A6YW38 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Gm28870A0A0A6YW38 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Gm28870A0A0A6YW38 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28870A0A0A6YW38 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28870A0A0A6YW38 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Gm28870A0A0A6YW38 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28870A0A0A6YW38 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm28870A0A0A6YW38 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28870A0A0A6YW38 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28870A0A0A6YW38 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28870A0A0A6YW38 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28870A0A0A6YW38 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28870A0A0A6YW38 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gm28870A0A0A6YW38 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28870A0A0A6YW38 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28870A0A0A6YW38 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28870A0A0A6YW38 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28870A0A0A6YW38 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28870A0A0A6YW38 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28870A0A0A6YW38 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28870A0A0A6YW38 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm28870A0A0A6YW38 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28870A0A0A6YW38 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28870A0A0A6YW38 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28870A0A0A6YW38 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms