Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.14■□□□□ 0.34
Trav13d-1A0A075B606 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-1A0A075B606 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-1A0A075B606 Gm30023-201ENSMUST00000197970 889 ntBASIC17.13■□□□□ 0.33
Trav13d-1A0A075B606 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-1A0A075B606 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-1A0A075B606 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
Trav13d-1A0A075B606 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-1A0A075B606 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-1A0A075B606 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-1A0A075B606 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.11■□□□□ 0.33
Trav13d-1A0A075B606 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-1A0A075B606 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-1A0A075B606 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-1A0A075B606 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-1A0A075B606 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-1A0A075B606 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-1A0A075B606 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13d-1A0A075B606 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13d-1A0A075B606 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-1A0A075B606 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav13d-1A0A075B606 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-1A0A075B606 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-1A0A075B606 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-1A0A075B606 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-1A0A075B606 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-1A0A075B606 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-1A0A075B606 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-1A0A075B606 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-1A0A075B606 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav13d-1A0A075B606 Particl-201ENSMUST00000205370 1560 ntBASIC17.02■□□□□ 0.32
Trav13d-1A0A075B606 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-1A0A075B606 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-1A0A075B606 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav13d-1A0A075B606 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13d-1A0A075B606 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-1A0A075B606 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-1A0A075B606 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav13d-1A0A075B606 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trav13d-1A0A075B606 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17■□□□□ 0.31
Trav13d-1A0A075B606 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-1A0A075B606 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13d-1A0A075B606 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-1A0A075B606 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.97■□□□□ 0.31
Trav13d-1A0A075B606 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav13d-1A0A075B606 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-1A0A075B606 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav13d-1A0A075B606 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav13d-1A0A075B606 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav13d-1A0A075B606 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-1A0A075B606 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-1A0A075B606 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav13d-1A0A075B606 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-1A0A075B606 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-1A0A075B606 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-1A0A075B606 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-1A0A075B606 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-1A0A075B606 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-1A0A075B606 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-1A0A075B606 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-1A0A075B606 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav13d-1A0A075B606 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms