Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC015849.2-201ENST00000605738 409 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC012360.2-201ENST00000609349 391 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC079949.2-201ENST00000617117 2933 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC073862.4-201ENST00000622982 854 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC015908.5-201ENST00000623289 343 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC011155.1-201ENST00000316512 456 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 Y_RNA.192-201ENST00000363977 102 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 SNORA51.2-201ENST00000364595 132 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 RPL12P23-201ENST00000405880 490 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 OR1AA1P-201ENST00000419597 916 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AL022400.1-201ENST00000423946 935 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AL358176.2-201ENST00000425769 204 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 C1DP1-201ENST00000426049 402 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 OR7E125P-201ENST00000443450 846 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AP002345.1-201ENST00000456493 928 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 SULT1D1P-201ENST00000458020 882 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AL390198.2-201ENST00000510553 222 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC004923.2-201ENST00000529649 369 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AP000889.1-201ENST00000530968 660 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 NANOGNBP2-201ENST00000544753 553 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC025918.2-201ENST00000558683 763 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC008269.2-201ENST00000561915 1105 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC100830.2-201ENST00000581636 240 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 MIR3149-201ENST00000584629 83 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 SNORA16A-202ENST00000628458 135 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC007485.2-201ENST00000623493 1667 ntBASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.49□□□□□ -1.05
PDZRN3Q9UPQ7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RNA5SP188-201ENST00000362916 129 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RNA5SP65-201ENST00000363166 119 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 SNORA70.3-201ENST00000365075 132 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RNA5SP279-201ENST00000365513 117 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RNU6-505P-201ENST00000384427 107 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RPS3AP9-201ENST00000417027 792 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC073464.1-201ENST00000429823 534 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 TAAR7P-201ENST00000436141 242 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms