Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC000111.2-201ENST00000448200 210 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC023424.1-201ENST00000496058 459 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP230-201ENST00000517039 122 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 IGKV1-32-201ENST00000519290 311 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC100784.1-201ENST00000522790 310 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC008126.1-201ENST00000549019 480 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC137768.1-201ENST00000549998 553 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC116553.2-201ENST00000564203 463 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC011453.2-201ENST00000603737 729 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC008833.1-201ENST00000611633 691 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC107905.1-201ENST00000616204 426 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 ZNF652P1-201ENST00000442420 1309 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC104260.2-201ENST00000623551 3497 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 RN7SKP115-201ENST00000363177 317 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 CYB5AP4-201ENST00000396692 399 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 RN7SKP16-201ENST00000410180 299 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 TBCAP2-201ENST00000416175 326 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AL590139.1-201ENST00000416267 400 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 OR1H1P-201ENST00000448731 937 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AL049874.2-201ENST00000492636 288 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 NIFKP7-201ENST00000503365 834 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 ENPP7P11-201ENST00000505915 627 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC008147.3-201ENST00000548666 354 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC104687.2-201ENST00000604442 342 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC138473.1-201ENST00000605717 526 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AL161616.1-201ENST00000611867 286 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 AL450345.1-202ENST00000605741 3881 ntBASIC4.37□□□□□ -1.71
CLCF1Q9UBD9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RPL21P67-201ENST00000402896 478 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AL357515.1-201ENST00000402967 542 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC114755.2-201ENST00000413520 361 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RPA2P2-201ENST00000419698 796 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 HSPE1P16-201ENST00000426640 348 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 FTLP19-201ENST00000433300 394 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC234781.3-201ENST00000452540 973 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AL513533.1-201ENST00000453728 415 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RPS4XP12-201ENST00000461747 709 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC147055.1-201ENST00000509261 750 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RNU6-513P-201ENST00000516104 104 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP228-201ENST00000516232 133 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms