Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FO393422.1-201ENST00000603908 708 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 RNU4-5P-201ENST00000607255 135 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL355816.1-201ENST00000607951 118 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC123767.1-202ENST00000620407 817 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC109454.4-201ENST00000623411 649 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC008993.2-201ENST00000631744 806 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC009452.1-201ENST00000640823 606 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC130304.1-201ENST00000622942 2385 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL391361.1-201ENST00000405580 489 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 GAPDHP49-201ENST00000421421 961 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 NANOGP5-201ENST00000424456 877 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 MTCYBP42-201ENST00000444653 1130 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 RPL38P3-201ENST00000484463 213 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC079203.1-201ENST00000487972 404 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC074087.1-201ENST00000512059 724 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC034205.1-201ENST00000520621 638 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 OR8G5-201ENST00000524943 1041 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 DEFB130C-202ENST00000530001 230 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL049872.1-201ENST00000556323 322 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC007346.2-201ENST00000564816 892 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 MIR3176-201ENST00000582210 90 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL589674.2-201ENST00000604304 337 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC116447.1-201ENST00000613153 453 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC018926.3-201ENST00000618841 406 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL390318.1-201ENST00000624564 687 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 CR392039.4-201ENST00000624968 501 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 OR2L1P-202ENST00000641567 1023 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AC092162.3-201ENST00000624511 1624 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 AL353796.1-201ENST00000561542 3241 ntBASIC5.32□□□□□ -1.56
LRFN1Q9P244 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LRFN1Q9P244 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRFN1Q9P244 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC005725.1-201ENST00000577346 2607 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 ASNSP1-204ENST00000641977 1664 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC125336.1-201ENST00000508893 2827 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms