Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC107027.3-201ENST00000565095 3473 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC017007.4-201ENST00000503353 1352 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 RNA5SP510-201ENST00000364697 99 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 RN7SKP153-201ENST00000365026 316 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC090018.1-201ENST00000434369 367 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 RPL5P25-201ENST00000441148 775 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL591363.1-201ENST00000450091 483 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 RPL7P45-201ENST00000455851 743 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 RPL7P40-201ENST00000481703 745 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC005912.1-201ENST00000495392 255 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC016559.2-201ENST00000510759 359 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC010476.1-201ENST00000519111 851 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC027104.1-201ENST00000563702 681 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 MIR1273E-201ENST00000581165 102 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC124856.1-201ENST00000600819 896 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL137072.1-201ENST00000603444 466 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC009027.1-201ENST00000604510 479 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AL356118.1-201ENST00000635272 1078 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 SEC63P2-201ENST00000503863 1939 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC009229.4-201ENST00000623854 1947 ntBASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
BRF2Q9HAW0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 AC002525.1-201ENST00000624392 1622 ntBASIC5.15□□□□□ -1.58
BRF2Q9HAW0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 AL132640.2-201ENST00000559968 1698 ntBASIC5.15□□□□□ -1.58
BRF2Q9HAW0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
BRF2Q9HAW0 OR9G4-201ENST00000302957 984 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 U3.7-201ENST00000363668 216 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 RPL6P29-201ENST00000414863 865 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 HYALP1-201ENST00000417674 1279 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 IPPKP1-201ENST00000422501 768 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 DEFB130D-201ENST00000426866 237 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 GSTM5P1-201ENST00000434751 660 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL031663.1-201ENST00000437445 219 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC073109.1-201ENST00000445066 978 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 OR52E3P-201ENST00000452083 936 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL035407.2-201ENST00000454090 378 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC079168.1-201ENST00000458741 345 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC110749.1-201ENST00000462007 357 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 RN7SKP157-201ENST00000516174 282 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 FTH1P11-201ENST00000517577 551 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms