Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 Y_RNA.77-201ENST00000362962 107 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RNA5SP394-201ENST00000364216 119 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU6-1215P-201ENST00000384441 102 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 SETP15-201ENST00000412724 337 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 BMS1P17-202ENST00000416720 316 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 NAP1L4P2-201ENST00000425958 899 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC124944.2-201ENST00000429866 1242 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC073410.1-201ENST00000435125 589 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC002504.1-201ENST00000438281 691 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ELOCP8-201ENST00000439309 332 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ARF4P4-201ENST00000439608 520 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC073052.1-201ENST00000440417 714 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ELOCP15-201ENST00000442090 332 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RPL36AP39-201ENST00000445859 318 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC104978.1-201ENST00000449387 391 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AP002345.1-201ENST00000456493 928 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RPS17P11-201ENST00000474297 293 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 MTND2P14-201ENST00000482139 351 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 TOMM22P4-201ENST00000511318 336 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC091135.1-201ENST00000585943 307 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL590229.1-201ENST00000603497 542 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC002069.2-201ENST00000603580 883 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RNA5SP440-201ENST00000612665 119 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 DDX18P6-201ENST00000450119 1997 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AL161912.4-201ENST00000623889 2468 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RN7SKP206-201ENST00000410823 293 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 CBX1P3-201ENST00000413296 527 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC113412.1-201ENST00000425840 504 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 CRIP1P1-201ENST00000427567 185 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC084290.1-201ENST00000434995 374 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RPS3AP38-201ENST00000435889 763 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AL391987.1-201ENST00000441025 200 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005297.1-201ENST00000444765 862 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms