Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 SNORA67-201ENST00000384423 137 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 MIR600-201ENST00000385007 98 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RPS3P2-201ENST00000421346 701 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC093655.2-201ENST00000425735 631 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RPS4XP16-201ENST00000427198 791 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 CYCSP6-201ENST00000434498 302 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 PPIAP13-201ENST00000434706 478 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RPS29P9-201ENST00000440360 171 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL354714.3-201ENST00000447284 493 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RHEBP2-201ENST00000450289 600 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RANP1-206ENST00000455094 651 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RPL7P45-201ENST00000455851 743 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RPL7P6-201ENST00000480903 738 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC092349.1-201ENST00000504903 310 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RNU6-941P-201ENST00000516346 108 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 RNA5SP373-201ENST00000517271 95 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 BUD31P1-201ENST00000521828 359 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC112191.2-201ENST00000522428 333 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC027544.3-201ENST00000535082 757 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 DUX4L52-201ENST00000549363 777 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 MTND6P33-201ENST00000571794 183 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC100767.2-201ENST00000604840 693 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC067838.1-201ENST00000606064 577 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC108865.2-201ENST00000606881 432 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AP005432.2-201ENST00000608162 586 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 MIR6071-201ENST00000616741 78 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL158062.1-201ENST00000619632 745 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC019206.1-201ENST00000621938 425 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC140113.4-201ENST00000622087 222 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AC012414.7-202ENST00000622705 1090 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL691477.1-201ENST00000624398 162 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 BMS1P21-201ENST00000634565 365 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 CYP4F35P-202ENST00000636121 390 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 DHX9P1-201ENST00000436565 3076 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 CR382285.2-201ENST00000624662 1495 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RNU1-20P-201ENST00000363314 162 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AL603766.1-201ENST00000407763 664 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 MIR1182-201ENST00000408363 97 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SNORA77-201ENST00000408716 125 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RN7SKP240-201ENST00000410583 375 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SUMO2P3-201ENST00000438311 288 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 DNAJA1P5-201ENST00000440278 943 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AL390119.1-201ENST00000440329 312 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC073052.1-201ENST00000440417 714 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms