Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC109446.4-201ENST00000623235 2755 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC021146.4-201ENST00000309229 279 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 RPL7AP25-201ENST00000423357 805 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL121578.1-201ENST00000428051 892 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC009963.4-201ENST00000448535 339 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL132656.3-201ENST00000606384 1595 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC114781.5-201ENST00000615297 108 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AL035461.2-201ENST00000619201 524 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 MFSD8-220ENST00000641243 1422 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AP005432.1-201ENST00000580891 3485 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.78□□□□□ -1.48
SNED1Q8TER0 STX3-208ENST00000641815 3236 ntBASIC5.78□□□□□ -1.48
SNED1Q8TER0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNED1Q8TER0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 RNU1-13P-201ENST00000384499 162 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 RPL21P67-201ENST00000402896 478 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 RN7SKP267-201ENST00000410381 285 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AL356387.2-201ENST00000422272 243 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 OR4C10P-201ENST00000434991 931 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 CYCSP34-201ENST00000458172 304 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC093227.2-201ENST00000589357 285 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC090953.1-201ENST00000604305 1092 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AL136370.1-201ENST00000608166 691 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC243960.7-201ENST00000623532 707 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC090220.1-201ENST00000593078 1699 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNED1Q8TER0 AC011447.7-201ENST00000624228 1590 ntBASIC5.77□□□□□ -1.49
SNED1Q8TER0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.77□□□□□ -1.49
SNED1Q8TER0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNED1Q8TER0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 QRSL1P2-201ENST00000418582 964 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 FTH1P16-201ENST00000435241 552 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 RPL7P19-201ENST00000469948 618 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 RPL21P129-201ENST00000491732 478 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 AC091167.1-201ENST00000492017 396 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 RN7SL652P-201ENST00000577769 300 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 AL133445.2-201ENST00000611191 527 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNED1Q8TER0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 RNA5SP196-201ENST00000625967 102 ntBASIC5.76□□□□□ -1.49
SNED1Q8TER0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNED1Q8TER0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNED1Q8TER0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.76□□□□□ -1.49
SNED1Q8TER0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 ATP5F1P2-201ENST00000398143 760 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 ARL4AP5-201ENST00000404372 599 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms