Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RARSP1-201ENST00000542842 1418 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 STX3-208ENST00000641815 3236 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 HMGB3P7-201ENST00000400214 611 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AL139039.2-201ENST00000407436 479 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 PTGES3P2-201ENST00000407942 482 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RNU4-34P-201ENST00000410431 124 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RPL23AP27-201ENST00000415161 451 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC093162.1-201ENST00000419682 124 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AL445528.1-201ENST00000426330 420 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 TPTE2P3-201ENST00000441562 1189 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 TRY2P-201ENST00000448860 689 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 MTND2P30-201ENST00000456663 382 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RPS3AP6-201ENST00000484430 795 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RN7SL558P-201ENST00000497468 299 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 RNA5SP303-201ENST00000516192 130 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 MORF4L1P3-201ENST00000525966 950 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC087763.1-201ENST00000603391 286 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC010608.3-201ENST00000625048 527 ntBASIC5.25□□□□□ -1.57
LMO3Q8TAP4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO3Q8TAP4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 RNA5SP123-201ENST00000363244 119 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 RPS3AP25-201ENST00000411660 793 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC112198.4-201ENST00000515450 351 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC008033.2-201ENST00000542626 177 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC020910.3-201ENST00000603701 874 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AL158050.2-201ENST00000605336 568 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AL451064.1-201ENST00000607718 471 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC007497.1-201ENST00000610421 561 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC004777.1-201ENST00000624317 287 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC009039.2-201ENST00000624524 529 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 CR381572.2-201ENST00000624852 397 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 AL034370.1-201ENST00000397254 1590 ntBASIC5.24□□□□□ -1.57
LMO3Q8TAP4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO3Q8TAP4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 CASC19-261ENST00000641853 1638 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 SNORA63.3-201ENST00000362682 132 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 CHMP1B2P-201ENST00000399581 597 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 AL021331.1-201ENST00000402817 582 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 ARL4AP5-201ENST00000404372 599 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 U3.35-201ENST00000408405 208 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 RN7SKP213-201ENST00000410746 298 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 CHEK2P3-201ENST00000416118 248 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 AC011242.1-201ENST00000433596 1158 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 MYO5BP2-201ENST00000449815 1277 ntBASIC5.23□□□□□ -1.57
LMO3Q8TAP4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO3Q8TAP4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms