Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL031601.1-201ENST00000605702 394 ntBASIC5.56□□□□□ -1.52
KRT78Q8N1N4 AL445423.1-201ENST00000609941 536 ntBASIC5.56□□□□□ -1.52
KRT78Q8N1N4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 VN1R7P-201ENST00000619242 903 ntBASIC5.56□□□□□ -1.52
KRT78Q8N1N4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 CDRT1-208ENST00000630868 794 ntBASIC5.56□□□□□ -1.52
KRT78Q8N1N4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRT78Q8N1N4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC010266.2-201ENST00000564741 3255 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 MIR133A2-201ENST00000347538 102 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 Y_RNA.472-201ENST00000384322 102 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 SNORA51.12-201ENST00000384448 134 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RNA5SP91-201ENST00000390902 119 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 MIR1203-201ENST00000408812 85 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RNU2-50P-201ENST00000410494 143 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RN7SKP279-201ENST00000411383 298 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RPL6P29-201ENST00000414863 865 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 Z75741.2-201ENST00000417272 1167 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 OR2X1P-201ENST00000421144 687 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RPL7P4-203ENST00000430239 730 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC073052.1-201ENST00000440417 714 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RPL10P17-201ENST00000453852 316 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RPL37P3-201ENST00000456825 293 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC097486.1-201ENST00000515331 210 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 RN7SKP283-201ENST00000517197 270 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC060775.1-201ENST00000518241 520 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC044913.1-201ENST00000557200 430 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 CCDC58P3-201ENST00000590792 430 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC010487.1-201ENST00000594408 1172 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC025165.5-201ENST00000602802 578 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AL138895.2-201ENST00000603019 178 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 NTAN1P1-201ENST00000603150 646 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC067773.1-201ENST00000603284 1094 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC002069.2-201ENST00000603580 883 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 HIRAP1-201ENST00000605318 787 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AP000238.1-201ENST00000608759 426 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC099676.1-201ENST00000608886 657 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC090607.5-201ENST00000615692 224 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 MIR6071-201ENST00000616741 78 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC013470.4-201ENST00000619978 986 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 CR788268.1-201ENST00000603931 1809 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC027228.2-201ENST00000567141 2154 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.55□□□□□ -1.52
KRT78Q8N1N4 AC005261.4-201ENST00000600047 1385 ntBASIC5.55□□□□□ -1.52
KRT78Q8N1N4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
KRT78Q8N1N4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
KRT78Q8N1N4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT78Q8N1N4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms