Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ENPP7P11-201ENST00000505915 627 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC092593.2-201ENST00000513866 913 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MRPS5P3-201ENST00000515577 166 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RN7SKP283-201ENST00000517197 270 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MTCO2P15-201ENST00000532655 656 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MIR4666A-201ENST00000580160 79 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC061975.8-201ENST00000587058 721 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MTND3P19-201ENST00000603825 345 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC107952.2-201ENST00000606048 486 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AL135999.3-201ENST00000610501 812 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC015819.1-201ENST00000613588 663 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MFSD8-245ENST00000641743 948 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MIR193BHG-214ENST00000641765 509 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC106872.5-201ENST00000508856 1416 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 CASC19-206ENST00000641028 1430 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC119744.1-201ENST00000454746 1715 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC025574.1-201ENST00000554784 1653 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RN7SKP184-201ENST00000362348 333 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RNU1-146P-201ENST00000364015 165 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RNA5SP211-201ENST00000365516 117 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RNU6-413P-201ENST00000384115 107 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 EI24P3-201ENST00000399046 1062 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL034417.1-201ENST00000399343 800 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL132875.1-201ENST00000403623 949 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RNU6-575P-201ENST00000411326 105 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RNU2-6P-201ENST00000411404 190 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 GSTM3P2-201ENST00000412746 530 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 CNOT7P1-201ENST00000429006 852 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 MOB1AP1-201ENST00000430903 535 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 SDC4P-201ENST00000453285 601 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ACA64.4-201ENST00000459070 127 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC083795.1-201ENST00000491760 320 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AP002453.1-201ENST00000492327 668 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC011411.1-201ENST00000509592 876 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AP001000.1-201ENST00000526843 742 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC127381.1-201ENST00000555979 939 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC090888.2-201ENST00000559765 1144 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC090695.1-201ENST00000561269 1222 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL078601.3-201ENST00000573303 535 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms