Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 MIR372-201ENST00000362225 67 ntBASIC4.65□□□□□ -1.67
RIF1Q5UIP0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 Z92545.1-201ENST00000411782 234 ntBASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC116562.1-201ENST00000485355 781 ntBASIC4.65□□□□□ -1.67
RIF1Q5UIP0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
RIF1Q5UIP0 AC010424.2-201ENST00000607594 443 ntBASIC4.65□□□□□ -1.67
RIF1Q5UIP0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AL390316.1-201ENST00000406279 553 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC092647.1-201ENST00000420654 287 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ARAFP2-201ENST00000440565 559 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC108463.1-201ENST00000450258 347 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 SLC25A14P1-201ENST00000502867 901 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 OR5BC1P-201ENST00000529327 739 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AL049794.2-201ENST00000616301 365 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 TCP11X1-202ENST00000622971 1372 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC097523.2-201ENST00000435551 652 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.64□□□□□ -1.67
RIF1Q5UIP0 AC007179.3-201ENST00000604976 235 ntBASIC4.64□□□□□ -1.67
RIF1Q5UIP0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AP000756.2-201ENST00000624168 2567 ntBASIC4.63□□□□□ -1.67
RIF1Q5UIP0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 BCORP1-203ENST00000513194 5093 ntBASIC4.63□□□□□ -1.67
RIF1Q5UIP0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AL691482.1-201ENST00000453255 87 ntBASIC4.63□□□□□ -1.67
RIF1Q5UIP0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC091979.2-201ENST00000607514 214 ntBASIC4.63□□□□□ -1.67
RIF1Q5UIP0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC019176.2-201ENST00000611579 315 ntBASIC4.63□□□□□ -1.67
RIF1Q5UIP0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
RIF1Q5UIP0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AL137058.3-201ENST00000624531 3099 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 OR51B3P-201ENST00000412287 913 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 COX6CP15-201ENST00000426313 211 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AC007389.2-201ENST00000434630 306 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AC073410.1-201ENST00000435125 589 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 RPL7P33-201ENST00000444159 742 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 TAAR4P-201ENST00000454843 1039 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 RNU1-103P-201ENST00000516502 125 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AC012409.3-201ENST00000611343 981 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AC019206.1-201ENST00000621938 425 ntBASIC4.62□□□□□ -1.67
RIF1Q5UIP0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIF1Q5UIP0 AL034549.2-201ENST00000618285 3373 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms