Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC133552.1-201ENST00000569988 4007 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 BX510359.2-201ENST00000417920 305 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 QRSL1P2-201ENST00000418582 964 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AL355994.1-201ENST00000424379 260 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 RPEP3-201ENST00000425462 676 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 EIF2S2P3-201ENST00000428356 999 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 DNAJC19P7-201ENST00000428811 344 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC068287.1-201ENST00000430283 295 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC091868.1-201ENST00000508746 304 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC016559.2-201ENST00000510759 359 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC105129.1-201ENST00000560250 297 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 SNORD39.2-201ENST00000579995 76 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 MIR5096-201ENST00000583713 70 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 RPL26P30-202ENST00000602923 645 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC012557.1-201ENST00000607115 611 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC010424.2-201ENST00000607594 443 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 OR51C1P-201ENST00000608504 942 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AL049794.2-201ENST00000616301 365 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC010435.1-201ENST00000623353 1177 ntBASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM1Q2M3G4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 ADAM24P-201ENST00000398655 2101 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC008758.3-201ENST00000507003 1829 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC068538.1-201ENST00000376856 336 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 SNORA48.4-201ENST00000391089 134 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC244033.1-201ENST00000426826 870 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 NDUFA5P9-201ENST00000472609 340 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC026979.1-201ENST00000492525 396 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 RPS27AP18-201ENST00000515536 459 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC093249.4-201ENST00000564755 259 ntBASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM1Q2M3G4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC005005.4-201ENST00000623789 16698 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 SNORA70F-201ENST00000384142 135 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC004690.1-201ENST00000418216 328 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AL121878.1-201ENST00000418638 859 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 RPL18P10-201ENST00000425606 538 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 CENPIP1-201ENST00000425713 902 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AL589765.3-201ENST00000446084 462 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms