Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM4P67936 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM4P67936 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM4P67936 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
TPM4P67936 TLK1P1-201ENST00000456760 2440 ntBASIC5.31□□□□□ -1.56
TPM4P67936 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM4P67936 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM4P67936 GAPDHP15-201ENST00000398586 975 ntBASIC5.31□□□□□ -1.56
TPM4P67936 VDAC2P1-201ENST00000399358 958 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.31□□□□□ -1.56
TPM4P67936 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM4P67936 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 RN7SL515P-201ENST00000463999 297 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AC012158.1-204ENST00000483430 465 ntBASIC5.31□□□□□ -1.56
TPM4P67936 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 RN7SKP5-201ENST00000517045 272 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM4P67936 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM4P67936 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM4P67936 FKBP1BP1-201ENST00000553366 325 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AC007066.2-202ENST00000566531 914 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AC027455.1-201ENST00000574104 594 ntBASIC5.31□□□□□ -1.56
TPM4P67936 AP002884.5-201ENST00000595053 1132 ntBASIC5.31□□□□□ -1.56
TPM4P67936 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM4P67936 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM4P67936 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM4P67936 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.31□□□□□ -1.56
TPM4P67936 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM4P67936 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM4P67936 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM4P67936 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
TPM4P67936 AC017104.4-201ENST00000636283 1592 ntBASIC5.3□□□□□ -1.56
TPM4P67936 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM4P67936 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM4P67936 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM4P67936 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM4P67936 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM4P67936 RN7SKP115-201ENST00000363177 317 ntBASIC5.3□□□□□ -1.56
TPM4P67936 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TPM4P67936 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM4P67936 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM4P67936 AL138899.2-201ENST00000439139 499 ntBASIC5.3□□□□□ -1.56
TPM4P67936 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM4P67936 AL591363.1-201ENST00000450091 483 ntBASIC5.3□□□□□ -1.56
TPM4P67936 AC092647.2-201ENST00000452998 253 ntBASIC5.3□□□□□ -1.56
TPM4P67936 RPSAP39-201ENST00000467439 883 ntBASIC5.3□□□□□ -1.56
TPM4P67936 PPIAP19-201ENST00000486414 492 ntBASIC5.3□□□□□ -1.56
TPM4P67936 AC108693.1-201ENST00000496068 432 ntBASIC5.3□□□□□ -1.56
TPM4P67936 PGAM1P13-201ENST00000507497 754 ntBASIC5.3□□□□□ -1.56
TPM4P67936 MYL12AP1-201ENST00000518490 515 ntBASIC5.3□□□□□ -1.56
TPM4P67936 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM4P67936 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM4P67936 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM4P67936 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM4P67936 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM4P67936 AL359742.1-201ENST00000622497 540 ntBASIC5.3□□□□□ -1.56
TPM4P67936 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TPM4P67936 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
TPM4P67936 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM4P67936 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TPM4P67936 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM4P67936 IRF5P1-201ENST00000504852 2164 ntBASIC5.29□□□□□ -1.56
TPM4P67936 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM4P67936 AL929601.4-201ENST00000613011 1341 ntBASIC5.29□□□□□ -1.56
TPM4P67936 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM4P67936 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM4P67936 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM4P67936 THAP12P4-201ENST00000528321 2266 ntBASIC5.29□□□□□ -1.56
TPM4P67936 AL031985.1-201ENST00000392713 418 ntBASIC5.29□□□□□ -1.56
TPM4P67936 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.29□□□□□ -1.56
TPM4P67936 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.29□□□□□ -1.56
TPM4P67936 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM4P67936 Z74021.1-201ENST00000423610 407 ntBASIC5.29□□□□□ -1.56
TPM4P67936 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM4P67936 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM4P67936 AL589765.3-201ENST00000446084 462 ntBASIC5.29□□□□□ -1.56
TPM4P67936 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM4P67936 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM4P67936 AC010547.7-201ENST00000570323 333 ntBASIC5.29□□□□□ -1.56
TPM4P67936 AC008966.2-201ENST00000606157 453 ntBASIC5.29□□□□□ -1.56
TPM4P67936 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM4P67936 AL022401.1-201ENST00000619498 108 ntBASIC5.29□□□□□ -1.56
TPM4P67936 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.29□□□□□ -1.56
TPM4P67936 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM4P67936 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM4P67936 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TPM4P67936 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TPM4P67936 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM4P67936 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TPM4P67936 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms