Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Y_RNA.719-201ENST00000517156 106 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS2P54868 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGCS2P54868 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 AC005191.1-201ENST00000603950 358 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 AL352984.2-202ENST00000613699 155 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 AC241377.1-201ENST00000619797 406 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS2P54868 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 AC012078.1-201ENST00000405035 1646 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 ICE2P1-201ENST00000512800 1849 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 AC011447.7-201ENST00000624228 1590 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC009643.2-201ENST00000603543 1448 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS2P54868 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGCS2P54868 RN7SKP267-201ENST00000410381 285 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 GAPDHP49-201ENST00000421421 961 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 GTF2IP2-201ENST00000424290 697 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 CBX1P1-201ENST00000440184 427 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 PRPF38AP1-201ENST00000451976 933 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 NIP7P2-201ENST00000485801 544 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 OR11I1P-201ENST00000486033 954 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC100784.1-201ENST00000522790 310 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS2P54868 AC023575.1-201ENST00000580510 358 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 AC008782.1-201ENST00000603386 430 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS2P54868 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGCS2P54868 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 RAD17P1-201ENST00000418130 2042 ntBASIC5.5□□□□□ -1.53
HMGCS2P54868 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS2P54868 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS2P54868 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HMGCS2P54868 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGCS2P54868 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS2P54868 MFSD8-220ENST00000641243 1422 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HMGCS2P54868 NACAP7-201ENST00000407371 609 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 PCNPP4-201ENST00000414817 517 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 SETP9-201ENST00000423837 832 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 AC092162.1-201ENST00000432828 434 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 AL451139.1-201ENST00000434718 346 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AC093166.2-201ENST00000455969 1017 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 MTND4LP2-201ENST00000502312 285 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 RNA5SP464-201ENST00000516251 108 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 RN7SKP21-201ENST00000516503 220 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS2P54868 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AL133338.2-201ENST00000604292 736 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 AL121890.3-201ENST00000618494 516 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS2P54868 AC068724.3-201ENST00000625906 87 ntBASIC5.49□□□□□ -1.53
HMGCS2P54868 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
HMGCS2P54868 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS2P54868 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGCS2P54868 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS2P54868 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS2P54868 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
HMGCS2P54868 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGCS2P54868 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGCS2P54868 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HMGCS2P54868 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HMGCS2P54868 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 SOCS5P3-201ENST00000425115 1576 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 Y_RNA.126-201ENST00000363382 111 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms