Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 RPL23AP12-201ENST00000467573 473 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 RN7SL814P-201ENST00000487715 300 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 BX510359.5-201ENST00000515651 304 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HNF4AP41235 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.11□□□□□ -1.59
HNF4AP41235 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 FKBP1AP1-201ENST00000594588 318 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 AL162431.4-201ENST00000604674 411 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC012467.1-201ENST00000607740 256 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 AP000864.1-201ENST00000609424 650 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL133445.2-201ENST00000611191 527 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC109309.2-201ENST00000612597 332 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL162574.2-201ENST00000614618 657 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC079298.2-201ENST00000623885 459 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC104820.1-201ENST00000624183 307 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC022417.1-201ENST00000624768 1303 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC008079.2-201ENST00000623543 20396 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.1□□□□□ -1.59
HNF4AP41235 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HNF4AP41235 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 OR5T3-201ENST00000303059 1023 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC006210.2-201ENST00000367074 1545 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC019155.1-201ENST00000382242 574 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 MIR143-201ENST00000385300 106 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HNF4AP41235 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 NPM1P4-201ENST00000414095 812 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC073136.2-201ENST00000417282 849 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC073464.3-201ENST00000422564 712 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 MTCO1P11-201ENST00000429111 1528 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 SPRYD7P1-201ENST00000443861 570 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 NDUFA5P8-201ENST00000449019 346 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 RPS26P41-201ENST00000450370 284 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC104634.1-201ENST00000452720 462 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC092691.2-201ENST00000461787 803 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 RWDD4P1-201ENST00000488019 565 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC021242.1-201ENST00000507315 2035 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC068446.3-201ENST00000555285 382 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.1□□□□□ -1.59
HNF4AP41235 RPL10P14-201ENST00000565265 298 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 AC005229.3-201ENST00000603438 323 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 BX322635.1-201ENST00000605804 496 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HNF4AP41235 BNIP3P41-202ENST00000616656 861 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.1□□□□□ -1.59
HNF4AP41235 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.1□□□□□ -1.59
HNF4AP41235 CYP4F35P-202ENST00000636121 390 ntBASIC5.1□□□□□ -1.59
HNF4AP41235 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HNF4AP41235 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HNF4AP41235 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.1□□□□□ -1.59
HNF4AP41235 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HNF4AP41235 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HNF4AP41235 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms