Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 AC069277.2-201ENST00000454211 432 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 HMGB1P4-201ENST00000455362 567 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 RPS17P2-201ENST00000461663 408 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 AC092709.1-201ENST00000521355 1045 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC8P31273 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 TVP23CP2-201ENST00000571473 623 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC8P31273 MIR5096-201ENST00000583713 70 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC8P31273 Z95327.3-201ENST00000610385 572 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC026367.3-201ENST00000619032 590 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 AC006840.1-201ENST00000623069 542 ntBASIC5.5□□□□□ -1.53
HOXC8P31273 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC8P31273 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC8P31273 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC8P31273 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC8P31273 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC8P31273 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC8P31273 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 OR5T3-201ENST00000303059 1023 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AC126755.2-208ENST00000327792 462 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AC138969.1-213ENST00000331436 462 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 RNU4-7P-201ENST00000364758 141 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
HOXC8P31273 SNORA70.6-201ENST00000383934 134 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 NPM1P37-201ENST00000403105 874 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 RAB28P1-201ENST00000411517 641 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 COX6CP13-201ENST00000428703 226 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 AC046176.1-201ENST00000435260 1170 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 AL450023.3-201ENST00000440592 271 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 RPL7AP61-201ENST00000443410 636 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC8P31273 VN1R48P-201ENST00000448149 1036 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 SLC25A18P1-201ENST00000449385 454 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC8P31273 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC8P31273 SCARNA22-201ENST00000503991 125 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC8P31273 HMGB1P47-201ENST00000511281 589 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC8P31273 AC020937.1-201ENST00000519677 1013 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 C1GALT1P3-201ENST00000522049 819 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC8P31273 MIR4675-201ENST00000577898 77 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC8P31273 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC8P31273 SNX6P1-201ENST00000601728 1224 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 AP000720.1-201ENST00000625091 483 ntBASIC5.49□□□□□ -1.53
HOXC8P31273 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC8P31273 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC8P31273 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
HOXC8P31273 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC8P31273 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC8P31273 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC8P31273 AP001284.1-201ENST00000528393 2118 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC8P31273 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC8P31273 AP005432.1-201ENST00000580891 3485 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC8P31273 ECM1P2-201ENST00000503354 1577 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC8P31273 OR1L6-202ENST00000373684 1044 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 AMZ2P2-201ENST00000406819 1057 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 USP9YP19-201ENST00000412165 485 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC8P31273 AL356806.1-201ENST00000422524 916 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 MRPS21P2-201ENST00000424704 264 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 AL445528.1-201ENST00000426330 420 ntBASIC5.48□□□□□ -1.53
HOXC8P31273 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC8P31273 AC089999.1-201ENST00000460336 374 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms