Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC008115.3-201ENST00000614874 549 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.87□□□□□ -1.63
CLPTM1O96005 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 HSPA8P17-201ENST00000427029 1382 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC107068.1-201ENST00000563286 4218 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC114786.1-201ENST00000512892 1415 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 YES1P1-201ENST00000418510 1628 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLPTM1O96005 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLPTM1O96005 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLPTM1O96005 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.86□□□□□ -1.63
CLPTM1O96005 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLPTM1O96005 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLPTM1O96005 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 SMG1P6-201ENST00000532337 2930 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLPTM1O96005 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLPTM1O96005 IL6STP1-201ENST00000346911 1020 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 RNA5SP242-201ENST00000364171 118 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.86□□□□□ -1.63
CLPTM1O96005 DBIP1-201ENST00000401435 260 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 PTGES3P2-201ENST00000407942 482 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.86□□□□□ -1.63
CLPTM1O96005 OR6E1P-201ENST00000414424 923 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 TRIM60P17-201ENST00000415181 719 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 RAB9AP4-201ENST00000415230 609 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.86□□□□□ -1.63
CLPTM1O96005 AC073136.2-201ENST00000417282 849 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 NENFP1-201ENST00000419476 466 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.86□□□□□ -1.63
CLPTM1O96005 DNAJB5P1-201ENST00000454004 806 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.86□□□□□ -1.63
CLPTM1O96005 RN7SL717P-201ENST00000478343 297 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLPTM1O96005 AC138866.2-201ENST00000508650 584 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC109464.1-201ENST00000511091 819 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC021146.3-201ENST00000511911 260 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC074087.1-201ENST00000512059 724 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 RNU6-491P-201ENST00000516099 110 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 RNA5SP228-201ENST00000516232 133 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 OR4V1P-201ENST00000525394 1140 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC022882.1-201ENST00000532142 501 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.86□□□□□ -1.63
CLPTM1O96005 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLPTM1O96005 SULT1C2P2-201ENST00000562517 294 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC106785.3-201ENST00000564064 847 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AC012146.2-201ENST00000576545 416 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 SNORD95-201ENST00000579879 68 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 RN7SL176P-201ENST00000580352 264 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 MIR4505-201ENST00000582238 73 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 AL450270.1-201ENST00000606160 391 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLPTM1O96005 AL136520.1-201ENST00000600311 1322 ntBASIC4.86□□□□□ -1.63
CLPTM1O96005 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLPTM1O96005 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLPTM1O96005 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.86□□□□□ -1.63
CLPTM1O96005 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AP000568.1-201ENST00000282964 442 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 RNU1-94P-201ENST00000362627 173 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 RNA5SP131-201ENST00000365452 119 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 RNU6-178P-201ENST00000384631 104 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 FMO7P-201ENST00000436045 768 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 PPIAP20-201ENST00000449839 135 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 RN7SL174P-201ENST00000475578 289 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 RPS3AP15-201ENST00000483874 781 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 RN7SL101P-201ENST00000496350 279 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC108157.1-201ENST00000510511 539 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC027338.1-201ENST00000514840 825 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms