Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 AC005332.5-201ENST00000591222 2919 ntBASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HLA-DRB4X5D2U9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
HLA-DRB4X5D2U9 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 SNORA70.10-201ENST00000384515 134 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 RNA5SP372-201ENST00000390836 115 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 LAP3P1-201ENST00000403648 294 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL139039.2-201ENST00000407436 479 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SKP273-201ENST00000411392 314 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 CEACAMP8-201ENST00000413902 580 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC013470.3-201ENST00000420252 1194 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 NMNAT1P2-201ENST00000435192 860 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL450023.3-201ENST00000440592 271 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 TCEA1P1-201ENST00000449716 880 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL691482.1-201ENST00000453255 87 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AL356981.1-201ENST00000454879 684 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC090114.3-201ENST00000479267 829 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC008410.1-201ENST00000483777 339 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SL629P-201ENST00000489622 285 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC109462.1-201ENST00000491087 368 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 OR10G5P-201ENST00000532733 358 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC107918.3-201ENST00000533272 382 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 GSTP1P1-201ENST00000548078 319 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 EIF1P5-201ENST00000585002 234 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC006116.3-201ENST00000592968 361 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC133552.5-201ENST00000604266 540 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC140113.4-201ENST00000622087 222 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 ECM1P2-201ENST00000503354 1577 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 AC091046.3-201ENST00000631455 1574 ntBASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DRB4X5D2U9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 CR788268.1-201ENST00000603931 1809 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 U8.4-201ENST00000363626 134 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 RNA5SP455-201ENST00000365190 119 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AL672167.2-201ENST00000377164 879 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 GAPDHP15-201ENST00000398586 975 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AL021331.1-201ENST00000402817 582 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC004448.2-201ENST00000422360 586 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC005532.2-201ENST00000467154 373 ntBASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DRB4X5D2U9 AC004980.4-201ENST00000513375 203 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms