Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC009237.10-201ENST00000414112 510 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 BX323845.1-201ENST00000432417 179 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AL450023.3-201ENST00000440592 271 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 TXNP5-201ENST00000441043 315 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 HMGB1P4-201ENST00000455362 567 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC010350.1-201ENST00000504908 231 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC116553.2-201ENST00000564203 463 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 OR7E18P-201ENST00000592589 702 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC093799.2-201ENST00000610062 578 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 AC140113.4-201ENST00000622087 222 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC233968.1-201ENST00000611212 1300 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 RNA5SP372-201ENST00000390836 115 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AL136116.2-201ENST00000404020 785 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 RN7SKP213-201ENST00000410746 298 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AL034379.1-201ENST00000423216 253 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 CEACAMP7-201ENST00000444105 496 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 Z80107.2-201ENST00000445127 392 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC073850.1-201ENST00000449243 255 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 MYO5BP2-201ENST00000449815 1277 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 IGHV5-78-201ENST00000450948 295 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 RPS6P2-201ENST00000454208 705 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC093166.2-201ENST00000455969 1017 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 BX284632.1-201ENST00000478218 541 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC004980.4-201ENST00000513375 203 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC013701.1-201ENST00000522657 465 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 GSTP1P1-201ENST00000548078 319 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 HMGN2P6-201ENST00000551091 273 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 GLRXP2-201ENST00000555594 321 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 MIR3691-201ENST00000578066 90 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 CASC19-255ENST00000641733 1385 ntBASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAPPC4Q9Y296 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 RNA5SP28-201ENST00000363841 119 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 SNORD96B-201ENST00000386148 79 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 AC007068.1-201ENST00000396690 844 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 CHMP1B2P-201ENST00000399581 597 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 SNORA79B-201ENST00000410557 148 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 SEPT7P8-201ENST00000413308 775 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 RPL23AP27-201ENST00000415161 451 ntBASIC4.5□□□□□ -1.69
TRAPPC4Q9Y296 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms