Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC011815.3-201ENST00000624194 473 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AL359922.3-201ENST00000624779 1670 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AC126755.2-208ENST00000327792 462 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AC138969.1-213ENST00000331436 462 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 RNU1-82P-201ENST00000390851 165 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 RNA5SP397-201ENST00000391323 118 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AL591848.1-201ENST00000413092 322 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 REREP1Y-201ENST00000422655 198 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 REREP2Y-201ENST00000439103 200 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AC092905.1-201ENST00000467527 949 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 NPM1P21-201ENST00000513394 762 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 OR5D2P-201ENST00000524390 911 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AC008147.3-201ENST00000548666 354 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 MIR4270-201ENST00000581799 70 ntBASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPC1L1Q9UHC9 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NPC1L1Q9UHC9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
NPC1L1Q9UHC9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.4□□□□□ -1.38
NPC1L1Q9UHC9 AC025574.1-201ENST00000554784 1653 ntBASIC6.4□□□□□ -1.38
NPC1L1Q9UHC9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.4□□□□□ -1.38
NPC1L1Q9UHC9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AL590240.1-201ENST00000334118 313 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AL049697.2-201ENST00000403708 294 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 RN7SKP267-201ENST00000410381 285 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC016712.1-201ENST00000431088 378 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC069304.1-201ENST00000491593 704 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 USP9YP2-201ENST00000504503 1000 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 USP9YP1-201ENST00000513521 1002 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 RNA5SP303-201ENST00000516192 130 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC020937.1-201ENST00000519677 1013 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 C1GALT1P3-201ENST00000522049 819 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 OR5AN2P-201ENST00000534535 896 ntBASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPC1L1Q9UHC9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AL731532.2-201ENST00000623542 1953 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 OR51H2P-202ENST00000641424 3046 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 NPM1P40-201ENST00000412758 733 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 COX6CP17-201ENST00000421389 185 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 OR2AH1P-201ENST00000425717 928 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 YWHAZP2-201ENST00000440317 728 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AL606490.8-201ENST00000441624 319 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 H2AFZP5-201ENST00000446960 382 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AC073264.2-201ENST00000448886 166 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AC073358.1-201ENST00000505671 684 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 RNU6-513P-201ENST00000516104 104 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 AC015912.2-201ENST00000571053 181 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 SCARNA15-201ENST00000607520 4325 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms