Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR7H2P-201ENST00000513483 306 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 NPM1P52-201ENST00000518264 846 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC104785.1-201ENST00000603220 588 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AL391358.1-201ENST00000605342 190 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC019206.1-201ENST00000621938 425 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 CR381572.2-201ENST00000624852 397 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC022417.1-201ENST00000624768 1303 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 SAMMSON-226ENST00000642089 1582 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RPL10P10-201ENST00000403509 664 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RN7SKP100-201ENST00000411258 284 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 COX5BP7-201ENST00000414780 274 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 PCNPP4-201ENST00000414817 517 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL136231.1-201ENST00000429407 730 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL356390.1-201ENST00000455684 397 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 COX6B1P2-201ENST00000489624 230 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC063949.1-201ENST00000552900 865 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 MIR4660-201ENST00000583549 74 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL512782.1-201ENST00000603093 364 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC005229.3-201ENST00000603438 323 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AL049794.2-201ENST00000616301 365 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 TRIM51GP-201ENST00000534741 1350 ntBASIC4.39□□□□□ -1.71
CLCF1Q9UBD9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP191-201ENST00000362585 102 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 SNORA73.1-201ENST00000363107 205 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AL691447.1-201ENST00000419456 387 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AC004074.1-201ENST00000421810 1063 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 TPTE2P1-204ENST00000435256 593 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 SCAND3P1-201ENST00000439854 1060 ntBASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCF1Q9UBD9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms