Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HMGB3P16-201ENST00000508037 287 ntBASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 MORF4L1P3-201ENST00000525966 950 ntBASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 RN7SL435P-201ENST00000584418 282 ntBASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 AC015871.5-202ENST00000623252 701 ntBASIC5.93□□□□□ -1.46
RPAP1Q9BWH6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC009643.2-201ENST00000603543 1448 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC099654.3-201ENST00000447087 1546 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 SNORA62-201ENST00000365493 153 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 SNORA70.10-201ENST00000384515 134 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AL359643.1-201ENST00000404109 423 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 CYCSP42-201ENST00000450823 238 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC026688.1-201ENST00000520639 1168 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AL049794.2-201ENST00000616301 365 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 AC241377.1-201ENST00000619797 406 ntBASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPAP1Q9BWH6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AL731566.1-201ENST00000620490 1937 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 GVINP1-202ENST00000531871 7271 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC126755.2-208ENST00000327792 462 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC138969.1-213ENST00000331436 462 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 MIR1271-201ENST00000408537 86 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC013429.2-201ENST00000418798 781 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 DNAJC19P7-201ENST00000428811 344 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 SCAND3P1-201ENST00000439854 1060 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC000111.2-201ENST00000448200 210 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 OR1H1P-201ENST00000448731 937 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC092905.1-201ENST00000467527 949 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC116562.1-201ENST00000485355 781 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC012414.7-202ENST00000622705 1090 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 AC087821.1-201ENST00000623639 567 ntBASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.91□□□□□ -1.46
RPAP1Q9BWH6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RPAP1Q9BWH6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPAP1Q9BWH6 AP001642.1-201ENST00000624727 2117 ntBASIC5.9□□□□□ -1.46
RPAP1Q9BWH6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPAP1Q9BWH6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPAP1Q9BWH6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 RNA5SP332-201ENST00000391063 115 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC017078.1-201ENST00000416146 368 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 TMBIM7P-201ENST00000418074 855 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 QRSL1P2-201ENST00000418582 964 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 RPL23AP56-201ENST00000460778 453 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 RNA5SP303-201ENST00000516192 130 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
RPAP1Q9BWH6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms