Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 SAMMSON-226ENST00000642089 1582 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 RNA5SP515-201ENST00000364570 118 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC044797.1-201ENST00000445744 679 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 RN7SL319P-201ENST00000480656 221 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 SCARNA22-201ENST00000503991 125 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 AL445487.1-201ENST00000415694 1580 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 OR4K15-201ENST00000305051 1216 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 LINC01881-201ENST00000416103 412 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 VN1R37P-201ENST00000419096 748 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 RN7SL802P-201ENST00000577858 299 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 VN1R85P-201ENST00000601587 426 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 AC020910.3-201ENST00000603701 874 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 MIR92B-201ENST00000607575 96 ntBASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM3Q8TF72 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 RNA5SP388-201ENST00000362584 119 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 RNA5SP332-201ENST00000391063 115 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC026688.1-201ENST00000520639 1168 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 UBE2FP2-201ENST00000566646 462 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL161616.1-201ENST00000611867 286 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 RPS27AP7-201ENST00000422792 455 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 Z74021.1-201ENST00000423610 407 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 TRGV7-201ENST00000427089 353 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL450023.3-201ENST00000440592 271 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL513533.1-201ENST00000453728 415 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC090686.1-201ENST00000481577 749 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC023424.1-201ENST00000496058 459 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 RPL23AP53-201ENST00000521854 457 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AL590392.1-201ENST00000604960 446 ntBASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.93□□□□□ -1.62
SHROOM3Q8TF72 AC011944.2-201ENST00000624440 683 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms