Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CCDC71Q8IV32 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AL109941.1-201ENST00000401925 229 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 MIR1271-201ENST00000408537 86 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 RPS26P13-201ENST00000419030 330 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 RBMY2QP-201ENST00000429799 1147 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 MTCO1P57-201ENST00000432182 261 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 NDUFA5P1-201ENST00000433858 341 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC090114.3-201ENST00000479267 829 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 RPS4XP20-201ENST00000505751 772 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 OR5D15P-201ENST00000531671 942 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC005000.1-201ENST00000536192 288 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AP002373.2-201ENST00000541631 1060 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 AC008814.1-201ENST00000603797 406 ntBASIC4.77□□□□□ -1.65
CCDC71Q8IV32 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC71Q8IV32 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AL589826.1-201ENST00000340697 249 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC013442.1-201ENST00000397347 228 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 HSPA8P15-201ENST00000401676 786 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RAB9AP4-201ENST00000415230 609 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RSL24D1P8-201ENST00000434442 492 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 TMX2P1-201ENST00000436507 708 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 MTND2P3-201ENST00000452458 470 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 snoU13.20-201ENST00000459180 104 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RPL21P6-201ENST00000479171 504 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RPL7P6-201ENST00000480903 738 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC005412.2-201ENST00000492004 341 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RN7SKP147-201ENST00000517154 244 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC105031.1-201ENST00000518550 476 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC013701.1-201ENST00000522657 465 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AP001922.4-201ENST00000526967 290 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC095055.1-201ENST00000603472 1113 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 RBPJP2-201ENST00000618187 1444 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AL139254.3-201ENST00000641097 674 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 CASC19-221ENST00000641309 1382 ntBASIC4.76□□□□□ -1.65
CCDC71Q8IV32 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCDC71Q8IV32 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms