Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RPL23AP4-201ENST00000427757 463 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AL022331.1-201ENST00000429025 477 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AL121776.1-201ENST00000429337 372 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 HIGD1AP4-201ENST00000430194 280 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 RPS23P9-201ENST00000448848 438 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 PSMC1P13-201ENST00000458195 985 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC119751.1-201ENST00000513357 765 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 OR8Q1P-201ENST00000526467 655 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 HMGB1P42-201ENST00000532126 553 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC091515.1-201ENST00000548110 679 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AL132657.2-201ENST00000564417 358 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 PCNAP1-202ENST00000595299 752 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AC114878.2-201ENST00000604863 1251 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 AL512624.1-201ENST00000613638 469 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 U6.48-201ENST00000618523 106 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 PWAR1-201ENST00000624188 2414 ntBASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD3Q3KNS1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AL121950.1-201ENST00000624993 2077 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC068870.1-201ENST00000563737 2455 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AL121886.1-201ENST00000358609 435 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 RN7SKP186-201ENST00000365371 303 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 RNA5SP30-201ENST00000365552 115 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AP000357.1-201ENST00000409926 1165 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 DPPA2P2-201ENST00000418220 897 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 RNF10P1-201ENST00000418589 369 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 RN7SL214P-201ENST00000487317 265 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 DUTP7-201ENST00000507982 486 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 GLUD1P3-202ENST00000508551 200 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC138866.2-201ENST00000508650 584 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 RNU6-615P-201ENST00000516065 106 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 IGLV3-24-201ENST00000517477 197 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 HIGD1AP18-201ENST00000520730 278 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 OR5AK3P-201ENST00000527486 1297 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC006518.2-201ENST00000542513 940 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 DPPA2P4-201ENST00000563717 878 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 FO393422.1-201ENST00000603908 708 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC104695.2-201ENST00000605056 775 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC022467.1-201ENST00000614738 749 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 OR8G7P-201ENST00000616658 848 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AC010975.3-201ENST00000618727 978 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 AL121895.2-201ENST00000619558 447 ntBASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
PTCHD3Q3KNS1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms