Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 RNU1-20P-201ENST00000363314 162 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 MIR143-201ENST00000385300 106 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 MIR921-201ENST00000401133 56 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 CYCSP10-201ENST00000417973 294 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 VN1R37P-201ENST00000419096 748 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 PDSS1P1-201ENST00000422953 1114 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 RPL7P51-201ENST00000490532 749 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 RPS4XP18-201ENST00000495480 763 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 AL136038.1-201ENST00000497246 351 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 RNA5SP362-201ENST00000516048 118 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC012339.2-201ENST00000523996 453 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 AC022882.1-201ENST00000532142 501 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC011270.1-201ENST00000558606 583 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AP005901.4-201ENST00000577336 569 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC233280.2-201ENST00000603917 1070 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC136428.4-201ENST00000634254 1155 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RFX4Q33E94 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX4Q33E94 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 OR51C1P-202ENST00000641159 1444 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RFX4Q33E94 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RFX4Q33E94 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
RFX4Q33E94 MTCO1P22-201ENST00000604619 1360 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RFX4Q33E94 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFX4Q33E94 LINC01109-201ENST00000603837 3081 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RFX4Q33E94 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFX4Q33E94 RNA5SP183-201ENST00000362452 119 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNA5SP132-201ENST00000364725 118 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-1320P-201ENST00000390838 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-1269P-201ENST00000391139 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX4Q33E94 HDGFP1-201ENST00000405943 252 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 OR51A6P-201ENST00000418680 1004 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AC108075.1-201ENST00000424692 529 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 BX323845.1-201ENST00000432417 179 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX4Q33E94 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AL354714.3-201ENST00000447284 493 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 NPM1P39-201ENST00000449818 867 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AL645937.3-201ENST00000453647 936 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-599P-201ENST00000459383 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-1193P-201ENST00000459461 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC009127.1-201ENST00000467090 155 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC104109.1-201ENST00000498563 436 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.53□□□□□ -1.68
RFX4Q33E94 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AC087477.6-201ENST00000559595 843 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX4Q33E94 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX4Q33E94 RPL26P30-202ENST00000602923 645 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 QTRT1P1-201ENST00000604344 1078 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC091979.2-201ENST00000607514 214 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AL159169.2-201ENST00000610061 1269 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC079395.2-201ENST00000610982 737 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX4Q33E94 MIR6837-201ENST00000620884 64 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-368P-201ENST00000620928 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 RNU6-538P-201ENST00000622329 107 ntBASIC4.53□□□□□ -1.68
RFX4Q33E94 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFX4Q33E94 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX4Q33E94 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RFX4Q33E94 ECM1P2-201ENST00000503354 1577 ntBASIC4.53□□□□□ -1.69
RFX4Q33E94 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RFX4Q33E94 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms