Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.86□□□□□ -1.47
PDS5AQ29RF7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MTCO1P22-201ENST00000604619 1360 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MIR298-201ENST00000401212 88 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 GLUD1P9-201ENST00000420997 1173 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 OR2B7P-201ENST00000429302 934 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 TRIM60P13-201ENST00000432350 1283 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC016831.4-201ENST00000438302 307 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 RAD1P2-201ENST00000446414 663 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 TPRKBP1-201ENST00000456243 481 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC010326.1-201ENST00000462726 602 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 RN7SL738P-201ENST00000470264 297 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC008897.1-201ENST00000494006 347 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MYL12BP2-201ENST00000503948 512 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 RNU1-6P-201ENST00000516290 144 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 RNU6-964P-201ENST00000516524 69 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MIR6853-201ENST00000619642 74 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AP000648.2-201ENST00000624182 404 ntBASIC5.85□□□□□ -1.47
PDS5AQ29RF7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDS5AQ29RF7 AC006484.1-201ENST00000435086 1884 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 RNA5SP505-201ENST00000364748 108 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 SNORA70F-201ENST00000384142 135 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 RPS3AP23-201ENST00000401762 784 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 RPS16P5-201ENST00000406501 404 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 VN1R37P-201ENST00000419096 748 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC089999.1-201ENST00000460336 374 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC006518.1-201ENST00000541449 943 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 MIR4433B-201ENST00000581329 102 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC019193.2-201ENST00000610012 634 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC138965.3-201ENST00000623875 498 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC020923.1-201ENST00000624021 917 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC106730.3-201ENST00000624568 641 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 AC006453.5-201ENST00000636451 619 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 TLK1P1-201ENST00000456760 2440 ntBASIC5.84□□□□□ -1.47
PDS5AQ29RF7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDS5AQ29RF7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDS5AQ29RF7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms