Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 RPL7L1P1-201ENST00000448259 785 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 FAR2P1-206ENST00000449736 709 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 OTX2P1-201ENST00000450956 354 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 RN7SL174P-201ENST00000475578 289 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 RN7SL97P-201ENST00000486780 299 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC104109.1-201ENST00000498563 436 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 CCNHP1-201ENST00000513311 678 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 SNORD91B-202ENST00000608459 222 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC097505.1-201ENST00000610199 565 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC012414.7-202ENST00000622705 1090 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC006453.5-201ENST00000636451 619 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKNOX1P55347 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AC008758.3-201ENST00000507003 1829 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC107021.2-201ENST00000567714 2095 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.75□□□□□ -1.65
PKNOX1P55347 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.75□□□□□ -1.65
PKNOX1P55347 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PKNOX1P55347 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PKNOX1P55347 U3.36-201ENST00000408418 213 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AC098592.2-201ENST00000413158 265 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AC096644.3-201ENST00000416788 338 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AL606490.1-201ENST00000452266 765 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 RN7SL222P-201ENST00000476452 299 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 DUX4L52-201ENST00000549363 777 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 AC087477.6-201ENST00000559595 843 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.75□□□□□ -1.65
PKNOX1P55347 SNORA74C-1-201ENST00000580726 201 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 AP001005.3-201ENST00000622049 129 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 AL353662.3-201ENST00000625131 237 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 AC139713.2-215ENST00000641428 5037 ntBASIC4.75□□□□□ -1.65
PKNOX1P55347 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PKNOX1P55347 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
PKNOX1P55347 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.75□□□□□ -1.65
PKNOX1P55347 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKNOX1P55347 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PKNOX1P55347 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKNOX1P55347 AC108751.5-201ENST00000492880 1336 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PKNOX1P55347 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.74□□□□□ -1.65
PKNOX1P55347 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKNOX1P55347 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKNOX1P55347 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PKNOX1P55347 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
PKNOX1P55347 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PKNOX1P55347 GAPDHP15-201ENST00000398586 975 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 AL021331.1-201ENST00000402817 582 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.74□□□□□ -1.65
PKNOX1P55347 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKNOX1P55347 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
PKNOX1P55347 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.74□□□□□ -1.65
PKNOX1P55347 UBE2V2P1-201ENST00000434717 398 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 TMX2P1-201ENST00000436507 708 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.74□□□□□ -1.65
PKNOX1P55347 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.74□□□□□ -1.65
PKNOX1P55347 AC000111.2-201ENST00000448200 210 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.74□□□□□ -1.65
PKNOX1P55347 RN7SL172P-201ENST00000460535 303 ntBASIC4.74□□□□□ -1.65
PKNOX1P55347 COPS8P2-201ENST00000473228 627 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms