Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 VN1R88P-201ENST00000596787 292 ntBASIC5.83□□□□□ -1.48
NEK3P51956 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.83□□□□□ -1.48
NEK3P51956 AC026979.4-201ENST00000606555 645 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AC116447.1-201ENST00000613153 453 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AC084824.4-201ENST00000620106 731 ntBASIC5.83□□□□□ -1.48
NEK3P51956 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
NEK3P51956 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 RNA5SP46-201ENST00000362370 120 ntBASIC5.82□□□□□ -1.48
NEK3P51956 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 NCSTNP1-201ENST00000406229 144 ntBASIC5.82□□□□□ -1.48
NEK3P51956 MIR1303-201ENST00000408625 86 ntBASIC5.82□□□□□ -1.48
NEK3P51956 RNU6-584P-201ENST00000410350 95 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AL357752.1-201ENST00000412817 349 ntBASIC5.82□□□□□ -1.48
NEK3P51956 USP9YP21-201ENST00000420603 432 ntBASIC5.82□□□□□ -1.48
NEK3P51956 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.82□□□□□ -1.48
NEK3P51956 CDC42P1-201ENST00000456658 548 ntBASIC5.82□□□□□ -1.48
NEK3P51956 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 RPL23AP71-201ENST00000470966 469 ntBASIC5.82□□□□□ -1.48
NEK3P51956 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.82□□□□□ -1.48
NEK3P51956 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 RPSAP51-201ENST00000497462 645 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AL035404.1-201ENST00000497982 568 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.82□□□□□ -1.48
NEK3P51956 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 RNU6-347P-201ENST00000516658 105 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.82□□□□□ -1.48
NEK3P51956 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.82□□□□□ -1.48
NEK3P51956 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.82□□□□□ -1.48
NEK3P51956 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 AC022404.1-201ENST00000555320 273 ntBASIC5.82□□□□□ -1.48
NEK3P51956 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 AL022067.1-201ENST00000602426 454 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC096947.1-201ENST00000603233 470 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.82□□□□□ -1.48
NEK3P51956 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.82□□□□□ -1.48
NEK3P51956 MIR6768-201ENST00000610734 72 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC007786.3-201ENST00000615154 596 ntBASIC5.82□□□□□ -1.48
NEK3P51956 MIR6133-201ENST00000617057 108 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AL590396.4-201ENST00000636779 956 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC017104.5-201ENST00000637647 639 ntBASIC5.82□□□□□ -1.48
NEK3P51956 AC139713.2-210ENST00000641741 992 ntBASIC5.82□□□□□ -1.48
NEK3P51956 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NEK3P51956 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEK3P51956 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.82□□□□□ -1.48
NEK3P51956 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.81□□□□□ -1.48
NEK3P51956 AC006206.1-201ENST00000544842 3387 ntBASIC5.81□□□□□ -1.48
NEK3P51956 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC092162.3-201ENST00000624511 1624 ntBASIC5.81□□□□□ -1.48
NEK3P51956 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEK3P51956 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NEK3P51956 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEK3P51956 AC093719.1-202ENST00000392735 373 ntBASIC5.81□□□□□ -1.48
NEK3P51956 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 RPS7P5-201ENST00000441482 581 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AP000281.1-201ENST00000444036 316 ntBASIC5.81□□□□□ -1.48
NEK3P51956 RPL37P3-201ENST00000456825 293 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 RNU6-615P-201ENST00000516065 106 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms