Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TPT1P1-201ENST00000458495 518 ntBASIC6.54□□□□□ -1.36
MRE11P49959 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 MYL12BP2-201ENST00000503948 512 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC091435.1-201ENST00000505442 584 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC010486.3-201ENST00000511602 785 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 RNA5SP438-201ENST00000516561 112 ntBASIC6.54□□□□□ -1.36
MRE11P49959 RNU6-943P-201ENST00000516960 98 ntBASIC6.54□□□□□ -1.36
MRE11P49959 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 NPM1P52-201ENST00000518264 846 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 CR383656.6-201ENST00000550518 394 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.54□□□□□ -1.36
MRE11P49959 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.54□□□□□ -1.36
MRE11P49959 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.54□□□□□ -1.36
MRE11P49959 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.54□□□□□ -1.36
MRE11P49959 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.54□□□□□ -1.36
MRE11P49959 AC084373.1-201ENST00000603311 235 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AL358072.1-201ENST00000604156 575 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC021851.1-201ENST00000608537 1082 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC008115.4-201ENST00000619780 775 ntBASIC6.54□□□□□ -1.36
MRE11P49959 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 AL590763.1-201ENST00000398297 1545 ntBASIC6.54□□□□□ -1.36
MRE11P49959 MTND4P8-201ENST00000514997 1362 ntBASIC6.54□□□□□ -1.36
MRE11P49959 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MRE11P49959 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 AC104623.2-202ENST00000623477 4002 ntBASIC6.53□□□□□ -1.36
MRE11P49959 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 AL731532.2-201ENST00000623542 1953 ntBASIC6.53□□□□□ -1.36
MRE11P49959 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MRE11P49959 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MRE11P49959 AL121886.1-201ENST00000358609 435 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC234772.1-201ENST00000377927 937 ntBASIC6.53□□□□□ -1.36
MRE11P49959 MIR141-201ENST00000384975 95 ntBASIC6.53□□□□□ -1.36
MRE11P49959 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 AC007068.1-201ENST00000396690 844 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AL645927.1-201ENST00000396783 406 ntBASIC6.53□□□□□ -1.36
MRE11P49959 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 MTND4LP21-201ENST00000415303 295 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC096644.3-201ENST00000416788 338 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 RBMY2KP-201ENST00000418221 992 ntBASIC6.53□□□□□ -1.36
MRE11P49959 FO393414.1-201ENST00000428697 1184 ntBASIC6.53□□□□□ -1.36
MRE11P49959 MTCO1P45-201ENST00000431457 267 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.53□□□□□ -1.36
MRE11P49959 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 SNRPFP2-201ENST00000440710 251 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 VN1R25P-201ENST00000443385 738 ntBASIC6.53□□□□□ -1.36
MRE11P49959 MTND1P29-201ENST00000448112 647 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC016027.4-201ENST00000450866 277 ntBASIC6.53□□□□□ -1.36
MRE11P49959 HIGD1AP16-201ENST00000450986 258 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC009220.1-201ENST00000451614 275 ntBASIC6.53□□□□□ -1.36
MRE11P49959 PPIAP7-201ENST00000454070 489 ntBASIC6.53□□□□□ -1.36
MRE11P49959 PSAT1P4-201ENST00000466500 526 ntBASIC6.53□□□□□ -1.36
MRE11P49959 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 AC093890.1-201ENST00000502554 540 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC105384.2-201ENST00000508433 640 ntBASIC6.53□□□□□ -1.36
MRE11P49959 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 RNA5SP434-201ENST00000516647 121 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.53□□□□□ -1.36
MRE11P49959 HMGB1P46-201ENST00000520062 610 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 AP000620.1-201ENST00000527147 504 ntBASIC6.53□□□□□ -1.36
MRE11P49959 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.53□□□□□ -1.36
MRE11P49959 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 AC092868.3-201ENST00000560515 784 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.53□□□□□ -1.36
MRE11P49959 AP005136.2-201ENST00000583253 1049 ntBASIC6.53□□□□□ -1.36
MRE11P49959 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 AC021171.1-201ENST00000603137 706 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AP002802.2-201ENST00000605877 235 ntBASIC6.53□□□□□ -1.36
MRE11P49959 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 AC009090.3-201ENST00000616553 565 ntBASIC6.53□□□□□ -1.36
MRE11P49959 AC092140.2-201ENST00000618027 521 ntBASIC6.53□□□□□ -1.36
MRE11P49959 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.53□□□□□ -1.36
MRE11P49959 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MRE11P49959 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms