Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF9P41273 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 AL442128.2-201ENST00000620246 1824 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC079741.1-201ENST00000321498 212 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 MIR141-201ENST00000384975 95 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 FAR2P2-201ENST00000413041 594 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AL591848.1-201ENST00000413092 322 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 VN1R37P-201ENST00000419096 748 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AC013268.2-201ENST00000420753 337 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 RPL7P57-201ENST00000423238 740 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 CKS1BP6-201ENST00000424932 240 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 FAR2P4-202ENST00000425399 584 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC108463.1-201ENST00000450258 347 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 RHEBP2-201ENST00000450289 600 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AL513533.1-201ENST00000453728 415 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.13□□□□□ -1.59
TNFSF9P41273 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFSF9P41273 RPL23AP72-201ENST00000492447 435 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.13□□□□□ -1.59
TNFSF9P41273 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TNFSF9P41273 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFSF9P41273 RN7SL652P-201ENST00000577769 300 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.13□□□□□ -1.59
TNFSF9P41273 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFSF9P41273 AC010503.3-201ENST00000594355 540 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 AC015914.2-201ENST00000618167 288 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
TNFSF9P41273 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 AL731532.2-201ENST00000623542 1953 ntBASIC5.13□□□□□ -1.59
TNFSF9P41273 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFSF9P41273 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF9P41273 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AL034370.1-201ENST00000397254 1590 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC005005.4-201ENST00000623789 16698 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AL672167.1-204ENST00000641875 3017 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 RNU6-398P-201ENST00000384143 109 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 MIR192-201ENST00000384915 110 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 RNU2-50P-201ENST00000410494 143 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 ATG4AP1-201ENST00000416893 538 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AC069213.2-201ENST00000420238 366 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AL359265.2-201ENST00000434367 631 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC004938.1-201ENST00000438468 308 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 MTND6P5-201ENST00000448266 512 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 MORF4L1P4-201ENST00000450245 976 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AC010326.1-201ENST00000462726 602 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.12□□□□□ -1.59
TNFSF9P41273 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC111000.5-201ENST00000506559 1178 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFSF9P41273 OR51K1P-201ENST00000510214 950 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC138832.1-201ENST00000522871 556 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.12□□□□□ -1.59
TNFSF9P41273 AC073137.1-201ENST00000605636 634 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 MIR6810-201ENST00000622701 70 ntBASIC5.12□□□□□ -1.59
TNFSF9P41273 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TNFSF9P41273 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFSF9P41273 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF9P41273 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TNFSF9P41273 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF9P41273 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF9P41273 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TNFSF9P41273 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF9P41273 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF9P41273 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF9P41273 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF9P41273 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TNFSF9P41273 MIR298-201ENST00000401212 88 ntBASIC5.11□□□□□ -1.59
TNFSF9P41273 AL049697.2-201ENST00000403708 294 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms