Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RPL7P1-201ENST00000468161 747 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 RPL7P9-201ENST00000468715 747 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 SETP11-201ENST00000473027 690 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC098583.1-201ENST00000480875 255 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 GAPDHP39-201ENST00000481866 979 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC124945.1-201ENST00000485133 188 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 RNU2-30P-201ENST00000516209 141 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 snoU109.5-201ENST00000516231 132 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 RNU6-720P-201ENST00000516363 108 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 Y_RNA.695-201ENST00000516715 107 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 Y_RNA.710-201ENST00000516975 110 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.05□□□□□ -1.44
COL6A2P12110 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AC008126.1-201ENST00000549019 480 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 RNU4ATAC-201ENST00000580972 127 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC119403.2-201ENST00000590960 598 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC036176.3-201ENST00000602456 418 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC009220.3-201ENST00000604318 586 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AL139286.2-201ENST00000606838 396 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
COL6A2P12110 MIR6503-201ENST00000622884 86 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL6A2P12110 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 AC003973.3-201ENST00000624863 2822 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL6A2P12110 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL6A2P12110 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 MAPK10-338ENST00000641647 3362 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL6A2P12110 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 RNU6-666P-201ENST00000363499 107 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 RNA5SP346-201ENST00000363541 121 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 RNA5SP485-201ENST00000365053 119 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 SNORD94-201ENST00000386037 137 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 MT-TH-201ENST00000387441 69 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 ARSFP1-201ENST00000398758 477 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 MIR1266-201ENST00000408125 84 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.04□□□□□ -1.44
COL6A2P12110 RNU6-920P-201ENST00000410926 92 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 MYL6P5-201ENST00000412707 459 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 GTF2IP23-201ENST00000423746 351 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 CENPIP1-201ENST00000425713 902 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 DPY19L1P2-201ENST00000426647 915 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 MGAT2P2-201ENST00000427194 797 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AL590399.2-201ENST00000427536 309 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 FTLP19-201ENST00000433300 394 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 RPS3AP38-201ENST00000435889 763 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 MTCYBP39-201ENST00000437562 491 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AL356121.1-201ENST00000442911 156 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 HIGD1AP16-201ENST00000450986 258 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 RPL5P24-201ENST00000463742 885 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 RPS4XP17-201ENST00000479057 754 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 RPL7P40-201ENST00000481703 745 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
COL6A2P12110 CCDC11P1-201ENST00000503137 1162 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.04□□□□□ -1.44
COL6A2P12110 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms