Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 RPS29P9-201ENST00000440360 171 ntBASIC4.84□□□□□ -1.63
LSM1O15116 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AL121877.1-201ENST00000453704 622 ntBASIC4.84□□□□□ -1.63
LSM1O15116 MTCYBP14-201ENST00000457471 715 ntBASIC4.84□□□□□ -1.63
LSM1O15116 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AC027308.1-201ENST00000517993 110 ntBASIC4.84□□□□□ -1.63
LSM1O15116 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AC005868.1-201ENST00000536421 331 ntBASIC4.84□□□□□ -1.63
LSM1O15116 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AL049830.4-201ENST00000555149 351 ntBASIC4.84□□□□□ -1.63
LSM1O15116 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 SNORD39.2-201ENST00000579995 76 ntBASIC4.84□□□□□ -1.63
LSM1O15116 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
LSM1O15116 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 SNORA17.5-201ENST00000630429 132 ntBASIC4.84□□□□□ -1.63
LSM1O15116 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LSM1O15116 AL356489.2-201ENST00000566968 3528 ntBASIC4.84□□□□□ -1.63
LSM1O15116 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.84□□□□□ -1.63
LSM1O15116 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LSM1O15116 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LSM1O15116 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
LSM1O15116 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LSM1O15116 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LSM1O15116 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
LSM1O15116 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LSM1O15116 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LSM1O15116 ATP5HP3-201ENST00000396994 486 ntBASIC4.83□□□□□ -1.64
LSM1O15116 RN7SKP114-201ENST00000410327 279 ntBASIC4.83□□□□□ -1.64
LSM1O15116 OR2X1P-201ENST00000421144 687 ntBASIC4.83□□□□□ -1.64
LSM1O15116 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AL357520.1-201ENST00000441557 453 ntBASIC4.83□□□□□ -1.64
LSM1O15116 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 HMGB1P4-201ENST00000455362 567 ntBASIC4.83□□□□□ -1.64
LSM1O15116 GYG1P1-201ENST00000460864 698 ntBASIC4.83□□□□□ -1.64
LSM1O15116 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.83□□□□□ -1.64
LSM1O15116 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
LSM1O15116 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 RNA5SP362-201ENST00000516048 118 ntBASIC4.83□□□□□ -1.64
LSM1O15116 RNA5SP303-201ENST00000516192 130 ntBASIC4.83□□□□□ -1.64
LSM1O15116 NPM1P52-201ENST00000518264 846 ntBASIC4.83□□□□□ -1.64
LSM1O15116 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AC012339.2-201ENST00000523996 453 ntBASIC4.83□□□□□ -1.64
LSM1O15116 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 AC097505.1-201ENST00000610199 565 ntBASIC4.83□□□□□ -1.64
LSM1O15116 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.83□□□□□ -1.64
LSM1O15116 AC079395.2-201ENST00000610982 737 ntBASIC4.83□□□□□ -1.64
LSM1O15116 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
LSM1O15116 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.83□□□□□ -1.64
LSM1O15116 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LSM1O15116 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.83□□□□□ -1.64
LSM1O15116 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.83□□□□□ -1.64
LSM1O15116 AC011493.1-201ENST00000596753 1632 ntBASIC4.83□□□□□ -1.64
LSM1O15116 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 KPNA2P2-201ENST00000419546 1489 ntBASIC4.82□□□□□ -1.64
LSM1O15116 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 RNA5SP242-201ENST00000364171 118 ntBASIC4.82□□□□□ -1.64
LSM1O15116 RNA5SP146-201ENST00000410743 123 ntBASIC4.82□□□□□ -1.64
LSM1O15116 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.82□□□□□ -1.64
LSM1O15116 AL513325.1-201ENST00000417716 1034 ntBASIC4.82□□□□□ -1.64
LSM1O15116 TMBIM7P-201ENST00000418074 855 ntBASIC4.82□□□□□ -1.64
LSM1O15116 QRSL1P2-201ENST00000418582 964 ntBASIC4.82□□□□□ -1.64
LSM1O15116 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.82□□□□□ -1.64
LSM1O15116 AC002069.1-201ENST00000429649 1159 ntBASIC4.82□□□□□ -1.64
LSM1O15116 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.82□□□□□ -1.64
LSM1O15116 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.82□□□□□ -1.64
LSM1O15116 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.82□□□□□ -1.64
LSM1O15116 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 SERPINA7P1-201ENST00000443077 631 ntBASIC4.82□□□□□ -1.64
LSM1O15116 SPRYD7P1-201ENST00000443861 570 ntBASIC4.82□□□□□ -1.64
LSM1O15116 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 AC112206.1-201ENST00000468416 477 ntBASIC4.82□□□□□ -1.64
LSM1O15116 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.82□□□□□ -1.64
LSM1O15116 AC108693.1-201ENST00000496068 432 ntBASIC4.82□□□□□ -1.64
LSM1O15116 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms