Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC109780.1-201ENST00000451768 1344 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AL929601.4-201ENST00000613011 1341 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 RNU1-83P-201ENST00000363426 164 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 U3.30-201ENST00000391308 210 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 DPPA2P3-201ENST00000411853 655 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 RPL23AP27-201ENST00000415161 451 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 EIF4A1P1-201ENST00000420241 934 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 TPT1P1-201ENST00000458495 518 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 GAPDHP56-201ENST00000506031 988 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 RN7SKP5-201ENST00000517045 272 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 BUD31P1-201ENST00000521828 359 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC122134.1-201ENST00000565664 1104 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 MIR5699-201ENST00000578903 90 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 IMMP1LP1-201ENST00000605170 488 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 AC091905.4-201ENST00000623432 202 ntBASIC4.81□□□□□ -1.64
TREX1Q9NSU2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC083843.2-201ENST00000568248 6253 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 RNA5SP123-201ENST00000363244 119 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 RNA5SP507-201ENST00000363603 121 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 RNU4-34P-201ENST00000410431 124 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC114755.2-201ENST00000413520 361 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 GLUD1P9-201ENST00000420997 1173 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 FABP7P2-201ENST00000429946 379 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 TDGF1P1-201ENST00000445734 527 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 OTX2P1-201ENST00000450956 354 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 RBMY2TP-201ENST00000451162 947 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC112206.1-201ENST00000468416 477 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC073358.1-201ENST00000505671 684 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC110775.1-201ENST00000513721 462 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 HMGN2P6-201ENST00000551091 273 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 RN7SL753P-201ENST00000581238 290 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC022726.1-201ENST00000587475 207 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC016769.4-201ENST00000616893 535 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AL121950.1-201ENST00000624993 2077 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 INTS6P1-201ENST00000504674 2530 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms