Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HNRNPCP1-201ENST00000556181 766 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC009097.3-201ENST00000563557 1018 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC027104.1-201ENST00000563702 681 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC025588.2-201ENST00000604851 466 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC005377.1-201ENST00000605126 456 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC096586.1-201ENST00000610267 561 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 OR1S1-201ENST00000624470 978 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC079416.3-201ENST00000624479 549 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 CASC19-222ENST00000641321 1173 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 SEC63P2-201ENST00000503863 1939 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC005294.1-201ENST00000355509 281 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 RNA5SP335-201ENST00000363817 110 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 RNU4-51P-201ENST00000364206 140 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 MTCO1P56-201ENST00000401674 224 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL133325.1-201ENST00000421090 382 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 CRIP1P1-201ENST00000427567 185 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 NPM1P22-201ENST00000427761 952 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 RPS6P15-201ENST00000431996 751 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 HMGB3P6-201ENST00000444896 598 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL589880.1-201ENST00000448271 287 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 PSAT1P4-201ENST00000466500 526 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 MTCO3P35-201ENST00000485582 781 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 RN7SL447P-201ENST00000494711 245 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AP000619.2-201ENST00000546014 969 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AL035411.2-201ENST00000604022 421 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC118658.2-201ENST00000618697 459 ntBASIC6.31□□□□□ -1.4
VTA1Q9NP79 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
VTA1Q9NP79 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTA1Q9NP79 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL731532.1-201ENST00000623972 4236 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC073055.1-201ENST00000456901 1621 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 RNA5SP507-201ENST00000363603 121 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC005042.1-201ENST00000393397 800 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL136310.1-201ENST00000404926 654 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 RNA5SP251-201ENST00000410614 137 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 RN7SKP273-201ENST00000411392 314 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 METTL15P3-201ENST00000415522 1221 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL449283.1-202ENST00000418249 604 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL513175.2-201ENST00000422071 443 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC021876.1-201ENST00000425959 359 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC092170.1-201ENST00000440211 356 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 PTGES3P5-201ENST00000455109 434 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 PSMC1P13-201ENST00000458195 985 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms