Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 TLK1P1-201ENST00000456760 2440 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 RNU1-85P-201ENST00000364127 164 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 RNU1-64P-201ENST00000365443 163 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 SNORA70C-201ENST00000384538 135 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 RNU1-82P-201ENST00000390851 165 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 RPL23AP59-201ENST00000399415 461 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AL358176.3-201ENST00000420757 454 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 YWHAZP2-201ENST00000440317 728 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC034236.1-201ENST00000469891 373 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC020593.1-201ENST00000507399 299 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 IGKV3OR22-2-201ENST00000517943 313 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 GLRXP2-201ENST00000555594 321 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC034105.4-201ENST00000568304 277 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 MTCYBP13-201ENST00000578634 1093 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AL445567.2-201ENST00000618935 498 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC008785.1-201ENST00000624475 456 ntBASIC7.24□□□□□ -1.25
SCAPERQ9BY12 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCAPERQ9BY12 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 GLUD1P9-201ENST00000420997 1173 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC108463.1-201ENST00000450258 347 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 RPL36AP41-201ENST00000493820 306 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC027369.5-201ENST00000533838 755 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 RN7SL290P-201ENST00000578661 300 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC090948.1-201ENST00000607464 549 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC243960.7-201ENST00000623532 707 ntBASIC7.23□□□□□ -1.25
SCAPERQ9BY12 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SCAPERQ9BY12 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC079168.2-201ENST00000453977 416 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 RPL7P19-201ENST00000469948 618 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC021193.1-201ENST00000511607 420 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC015795.1-201ENST00000513669 327 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 RN7SL652P-201ENST00000577769 300 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC022884.2-201ENST00000578535 580 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC011477.5-201ENST00000586571 259 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AL133338.2-201ENST00000604292 736 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCAPERQ9BY12 SALL4P2-201ENST00000423288 2910 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 AC007998.4-201ENST00000612496 2533 ntBASIC7.22□□□□□ -1.25
SCAPERQ9BY12 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 OR14L1P-202ENST00000641545 3009 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 RNA5SP241-201ENST00000391326 114 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 CYP4F29P-201ENST00000420685 446 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 SNORA84-201ENST00000459229 133 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 MRPL49P2-201ENST00000521066 465 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 AC092709.1-201ENST00000521355 1045 ntBASIC7.21□□□□□ -1.25
SCAPERQ9BY12 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms