Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC020779.1-201ENST00000478757 796 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 RPL7P40-201ENST00000481703 745 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 RPL15P21-201ENST00000495592 567 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.16□□□□□ -1.58
PKP4Q99569 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.16□□□□□ -1.58
PKP4Q99569 ATP5LP3-201ENST00000514223 304 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AC034244.2-201ENST00000514668 858 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 AC026407.1-201ENST00000518369 204 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 NPM1P35-201ENST00000533043 868 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.16□□□□□ -1.58
PKP4Q99569 RN7SL290P-201ENST00000578661 300 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.16□□□□□ -1.58
PKP4Q99569 RN7SL753P-201ENST00000581238 290 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AL162431.4-201ENST00000604674 411 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AC109309.2-201ENST00000612597 332 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 AL139407.1-201ENST00000613826 1175 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 MIR6729-201ENST00000618194 65 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 CYP4F35P-202ENST00000636121 390 ntBASIC5.16□□□□□ -1.58
PKP4Q99569 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
PKP4Q99569 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKP4Q99569 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PKP4Q99569 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PKP4Q99569 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PKP4Q99569 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PKP4Q99569 AMZ2P2-201ENST00000406819 1057 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.15□□□□□ -1.59
PKP4Q99569 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.15□□□□□ -1.59
PKP4Q99569 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 RPA2P2-201ENST00000419698 796 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC073508.1-201ENST00000428866 656 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AL606490.7-201ENST00000433136 191 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 MTND1P26-201ENST00000440488 538 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 NOP56P2-201ENST00000447491 769 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 MORF4L1P4-201ENST00000450245 976 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC096741.1-201ENST00000472250 846 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 RPS4XP1-201ENST00000482189 787 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 RPL7P41-201ENST00000485823 957 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC022133.1-201ENST00000490961 571 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC093801.2-201ENST00000503966 1050 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 PCNAP1-201ENST00000505363 709 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.15□□□□□ -1.59
PKP4Q99569 PGAM1P13-201ENST00000507497 754 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 RFPL4AP5-201ENST00000514977 504 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 MTCYBP19-201ENST00000517463 1124 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC022360.1-201ENST00000521058 340 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.15□□□□□ -1.59
PKP4Q99569 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC074029.2-201ENST00000551045 634 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.15□□□□□ -1.59
PKP4Q99569 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PKP4Q99569 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.15□□□□□ -1.59
PKP4Q99569 AC068020.1-201ENST00000594215 661 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC124856.1-201ENST00000600819 896 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC130352.1-201ENST00000602979 661 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AC005776.1-201ENST00000603164 290 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 MIR6862-1-201ENST00000613016 70 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 MIR6862-2-201ENST00000614755 70 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 AP003485.1-201ENST00000625093 753 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 OR4G3P-201ENST00000633500 913 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 CASC19-264ENST00000641912 1184 ntBASIC5.15□□□□□ -1.59
PKP4Q99569 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PKP4Q99569 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKP4Q99569 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
PKP4Q99569 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.14□□□□□ -1.59
PKP4Q99569 AC112198.2-201ENST00000426589 6996 ntBASIC5.14□□□□□ -1.59
PKP4Q99569 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
PKP4Q99569 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKP4Q99569 RNA5SP183-201ENST00000362452 119 ntBASIC5.14□□□□□ -1.59
PKP4Q99569 SNORA63.3-201ENST00000362682 132 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms