Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RNF138P2-201ENST00000603490 592 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 TMEM30CP-203ENST00000637814 1035 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AL133268.1-201ENST00000405676 1401 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC093909.5-201ENST00000621839 1799 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 SNURFL-201ENST00000309296 343 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC007068.1-201ENST00000396690 844 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AL109941.1-201ENST00000401925 229 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 FABP7P2-201ENST00000429946 379 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 IGHV5-78-201ENST00000450948 295 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 CYCSP34-201ENST00000458172 304 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC108751.2-201ENST00000469993 231 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC097484.1-201ENST00000471148 389 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 RPS23P1-201ENST00000491662 432 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC004980.4-201ENST00000513375 203 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 OR5D15P-201ENST00000531671 942 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 AC092111.2-201ENST00000611627 1414 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 THAP12P4-201ENST00000528321 2266 ntBASIC5.03□□□□□ -1.6
C9orf72Q96LT7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf72Q96LT7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 RNU4-44P-201ENST00000363050 141 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 SETP10-201ENST00000424368 814 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC012519.1-201ENST00000424588 610 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC092162.1-201ENST00000432828 434 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC093890.1-201ENST00000502554 540 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC110775.1-201ENST00000513721 462 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AL358913.1-201ENST00000554342 121 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 OR1F2P-201ENST00000570470 933 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 IMMP1LP1-201ENST00000605170 488 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC116651.1-201ENST00000609724 556 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC073575.2-201ENST00000614212 627 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
C9orf72Q96LT7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf72Q96LT7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms