Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
AP3S1Q92572 MIR600-201ENST00000385007 98 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AL596448.1-201ENST00000415024 392 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 Z82198.3-201ENST00000421145 199 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AL451139.1-201ENST00000434718 346 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 SCAND3P1-201ENST00000439854 1060 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC093166.3-201ENST00000448785 303 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AL162388.1-201ENST00000450912 352 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC243772.1-201ENST00000451620 410 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC007386.1-201ENST00000455212 582 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC010469.1-201ENST00000463864 576 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 RPS4XP20-201ENST00000505751 772 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.24□□□□□ -1.73
AP3S1Q92572 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 RNU6-709P-201ENST00000517257 104 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.24□□□□□ -1.73
AP3S1Q92572 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.24□□□□□ -1.73
AP3S1Q92572 OR1F2P-201ENST00000570470 933 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 MRPL45P2-203ENST00000573318 473 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.24□□□□□ -1.73
AP3S1Q92572 RPL7P50-201ENST00000600588 727 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC011500.1-201ENST00000601963 469 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.24□□□□□ -1.73
AP3S1Q92572 AL135786.2-201ENST00000608422 615 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 AC015813.4-201ENST00000610469 179 ntBASIC4.24□□□□□ -1.73
AP3S1Q92572 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
AP3S1Q92572 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
AP3S1Q92572 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.24□□□□□ -1.73
AP3S1Q92572 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP3S1Q92572 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
AP3S1Q92572 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP3S1Q92572 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP3S1Q92572 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 SNORA70-201ENST00000384436 135 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AL136116.2-201ENST00000404020 785 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 OR6E1P-201ENST00000414424 923 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 BMS1P17-202ENST00000416720 316 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC093655.2-201ENST00000425735 631 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 FAM96AP1-201ENST00000430879 482 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.23□□□□□ -1.73
AP3S1Q92572 BX323845.1-201ENST00000432417 179 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.23□□□□□ -1.73
AP3S1Q92572 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC011476.1-201ENST00000466725 307 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 RPL7P6-201ENST00000480903 738 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AC090142.2-201ENST00000483263 416 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 NACAP5-201ENST00000509863 636 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 PPBPP1-201ENST00000510807 373 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.23□□□□□ -1.73
AP3S1Q92572 MIR3154-201ENST00000577829 84 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 AL359757.1-201ENST00000623176 255 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 AC011815.3-201ENST00000624194 473 ntBASIC4.23□□□□□ -1.73
AP3S1Q92572 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.23□□□□□ -1.73
AP3S1Q92572 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.23□□□□□ -1.73
AP3S1Q92572 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.23□□□□□ -1.73
AP3S1Q92572 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
AP3S1Q92572 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC235565.1-201ENST00000456962 1325 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP3S1Q92572 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.22□□□□□ -1.73
AP3S1Q92572 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC011155.1-201ENST00000316512 456 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP3S1Q92572 MIR365B-201ENST00000362317 111 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP3S1Q92572 RNA5SP122-201ENST00000384457 108 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 MIR708-201ENST00000390708 88 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 RNA5SP339-201ENST00000390987 122 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms