Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC074029.2-201ENST00000551045 634 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 EDDM3DP-201ENST00000554692 434 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AP005403.1-201ENST00000579720 229 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC011447.4-201ENST00000587562 111 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 BNIP3P31-201ENST00000604515 566 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC005084.1-201ENST00000605160 304 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AL450270.1-201ENST00000606160 391 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AL391834.2-201ENST00000609982 546 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC015660.5-201ENST00000623238 564 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC087565.3-202ENST00000642085 1603 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF4Q92544 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.96□□□□□ -1.62
TM9SF4Q92544 AC003973.3-201ENST00000624863 2822 ntBASIC4.96□□□□□ -1.62
TM9SF4Q92544 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 U3.2-201ENST00000362981 210 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 RNU6-249P-201ENST00000363016 102 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 RNU1-106P-201ENST00000384382 164 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 RBMY2KP-201ENST00000418221 992 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 HSPE1P16-201ENST00000426640 348 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 RPL7AP49-201ENST00000429522 581 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AL591438.1-201ENST00000433508 581 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 RNF2P1-201ENST00000442955 1010 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AL035090.1-201ENST00000454835 332 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC016559.2-201ENST00000510759 359 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC109464.1-201ENST00000511091 819 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 RNU6-513P-201ENST00000516104 104 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC008126.1-201ENST00000549019 480 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC040958.1-201ENST00000561102 201 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 MTCYBP13-201ENST00000578634 1093 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 OR1AB1P-201ENST00000585564 761 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 BNIP3P40-201ENST00000596017 556 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 RPAP2P1-201ENST00000603626 1168 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC009597.2-201ENST00000604659 592 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 MIR6820-201ENST00000611508 62 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 EIF3FP1-201ENST00000613970 806 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC099494.2-201ENST00000623371 978 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC023421.1-201ENST00000590535 1785 ntBASIC4.95□□□□□ -1.62
TM9SF4Q92544 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF4Q92544 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TM9SF4Q92544 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF4Q92544 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TM9SF4Q92544 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TM9SF4Q92544 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.94□□□□□ -1.62
TM9SF4Q92544 AC103591.2-201ENST00000265259 766 ntBASIC4.94□□□□□ -1.62
TM9SF4Q92544 MIR421-201ENST00000365696 85 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms