Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS3Q8IXF0 KARSP2-201ENST00000415696 1639 ntBASIC7.27□□□□□ -1.25
NPAS3Q8IXF0 AC079298.1-201ENST00000625026 1619 ntBASIC7.27□□□□□ -1.25
NPAS3Q8IXF0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
NPAS3Q8IXF0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.27□□□□□ -1.25
NPAS3Q8IXF0 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 ASNSP1-204ENST00000641977 1664 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR11H4-201ENST00000315409 1082 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RPL11P4-201ENST00000332269 436 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RNA5SP88-201ENST00000365560 109 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 SNORA70G-201ENST00000383923 142 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RPS27AP11-201ENST00000402798 447 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RNU2-8P-201ENST00000410727 190 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 THEM7P-201ENST00000419556 672 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC006065.1-201ENST00000422539 802 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RPL7P54-201ENST00000438336 674 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC245291.3-201ENST00000443400 292 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RAB28P3-201ENST00000448325 597 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR52Y1P-201ENST00000452418 828 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AL035407.2-201ENST00000454090 378 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RPL34P34-201ENST00000465389 354 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC007182.2-201ENST00000489251 402 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AP005202.1-201ENST00000489915 867 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RPL35P6-201ENST00000490024 372 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC104564.1-201ENST00000493028 407 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 RN7SL569P-201ENST00000494652 288 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC120036.3-201ENST00000517826 292 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC107953.1-201ENST00000522216 297 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AP002404.1-201ENST00000532005 451 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC137768.1-201ENST00000549998 553 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 MIR4732-201ENST00000581873 76 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC010327.2-201ENST00000587647 488 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 Z69720.2-201ENST00000624755 279 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 AC135068.12-201ENST00000637370 931 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 OR6M2P-202ENST00000641780 2063 ntBASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPAS3Q8IXF0 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 RNU6-549P-201ENST00000384433 107 ntBASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPAS3Q8IXF0 FDPSP5-201ENST00000399474 1057 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms