Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 SEC63P2-201ENST00000503863 1939 ntBASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM48Q8IWZ4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.02□□□□□ -1.44
TRIM48Q8IWZ4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC073429.2-201ENST00000569694 1444 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 SNORA21-201ENST00000362423 132 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 RNU6-452P-201ENST00000384406 107 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 TAF9BP1-201ENST00000396646 746 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 VDAC2P1-201ENST00000399358 958 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 CBX1P3-201ENST00000413296 527 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL353662.1-201ENST00000439099 327 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC002542.1-201ENST00000440683 193 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 RPS10P18-201ENST00000442662 495 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 OR13K1P-201ENST00000444577 975 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 GAPDHP23-201ENST00000444823 993 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 PSMC1P13-201ENST00000458195 985 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 CCDC75P1-201ENST00000469247 791 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 SETP11-201ENST00000473027 690 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC037198.2-201ENST00000478845 733 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 KCTD9P4-201ENST00000526766 1166 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC090888.3-201ENST00000558917 509 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 CYCSP38-201ENST00000559840 322 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 ROCK1P1-201ENST00000573767 549 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC100767.2-201ENST00000604840 693 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AP002360.4-201ENST00000606980 481 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL591167.1-201ENST00000607321 456 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL391497.1-201ENST00000608671 547 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC131235.4-201ENST00000609288 620 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC015540.1-201ENST00000615828 501 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 TCL6_3.1-201ENST00000619064 137 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL356121.2-201ENST00000624715 780 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC116618.1-201ENST00000634617 774 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC006511.3-201ENST00000624929 1783 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AL161901.1-201ENST00000624954 3425 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC027279.4-201ENST00000624371 2072 ntBASIC6.02□□□□□ -1.45
TRIM48Q8IWZ4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 HSPD1P8-201ENST00000400121 1658 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC123769.1-201ENST00000530992 3192 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 QRSL1P1-201ENST00000400977 1540 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms