Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MTCO1P4-201ENST00000520516 1409 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AL158152.1-201ENST00000602652 1435 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC109446.4-201ENST00000623235 2755 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AP000473.2-201ENST00000602659 1537 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 MIR16-2-201ENST00000362117 81 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 COX6B1P1-201ENST00000415962 213 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 DPPA2P2-201ENST00000418220 897 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 RPL12P17-201ENST00000432393 498 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 RPL6P5-201ENST00000445678 828 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 RPL7P16-201ENST00000479738 738 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 PDCL3P4-201ENST00000489621 720 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AP002373.2-201ENST00000541631 1060 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC006116.7-201ENST00000590141 756 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC234771.5-201ENST00000600161 514 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 AC009597.2-201ENST00000604659 592 ntBASIC5.81□□□□□ -1.48
HERC6Q8IVU3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HERC6Q8IVU3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC144833.1-201ENST00000567953 4089 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL078599.1-201ENST00000402075 293 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 RPS4XP9-201ENST00000405151 780 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC096921.1-201ENST00000411661 375 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL590139.1-201ENST00000416267 400 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 RPL12P39-201ENST00000455456 496 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 RN7SL481P-201ENST00000477764 299 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 RPL5P22-201ENST00000480199 884 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC008897.1-201ENST00000494006 347 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC112518.2-201ENST00000508565 425 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 RN7SKP253-201ENST00000516424 309 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 OR8X1P-201ENST00000534542 869 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC122134.1-201ENST00000565664 1104 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC079880.2-201ENST00000603790 1213 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC025175.1-201ENST00000606482 759 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AC018645.2-201ENST00000609151 472 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.8□□□□□ -1.48
HERC6Q8IVU3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HERC6Q8IVU3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms