Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC005261.2-201ENST00000593427 4258 ntBASIC4.84□□□□□ -1.64
SEC61A1P61619 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SEC61A1P61619 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SEC61A1P61619 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.84□□□□□ -1.64
SEC61A1P61619 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.84□□□□□ -1.64
SEC61A1P61619 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 OR13C1P-202ENST00000641378 2919 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC245100.2-201ENST00000454544 1679 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC104623.2-202ENST00000623477 4002 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A1P61619 RNY3P9-201ENST00000384727 106 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC211486.3-201ENST00000412694 621 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC092648.1-201ENST00000425870 423 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 GAPDHP48-201ENST00000436626 961 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 AL138787.1-202ENST00000437804 898 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AL117351.1-201ENST00000438864 766 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AL031313.1-201ENST00000448435 256 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 OR52E3P-201ENST00000452083 936 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
SEC61A1P61619 TPT1P1-201ENST00000458495 518 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 RPS17P11-201ENST00000474297 293 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 RN7SL717P-201ENST00000478343 297 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.83□□□□□ -1.64
SEC61A1P61619 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A1P61619 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A1P61619 UBTFL10-201ENST00000528532 562 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 MTCYBP27-201ENST00000555160 670 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC016839.1-201ENST00000578162 867 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 SNORD95-201ENST00000579879 68 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 RNA5SP440-201ENST00000612665 119 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 RN7SL544P-201ENST00000617232 284 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 RN7SL763P-201ENST00000620922 284 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC093875.1-201ENST00000623688 504 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC087565.3-203ENST00000641018 837 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SEC61A1P61619 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC104260.2-201ENST00000623551 3497 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
SEC61A1P61619 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A1P61619 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A1P61619 AC093849.1-201ENST00000563631 2209 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SEC61A1P61619 Z95331.1-201ENST00000623075 23112 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC007842.1-201ENST00000597336 2039 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms