Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD13P35453 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HOXD13P35453 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD13P35453 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD13P35453 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD13P35453 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 SNURFL-201ENST00000309296 343 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 OR9K1P-201ENST00000326513 941 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 RNU4-31P-201ENST00000384211 141 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXD13P35453 DPPA2P3-201ENST00000411853 655 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD13P35453 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXD13P35453 RPS17P2-201ENST00000461663 408 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AC097484.1-201ENST00000471148 389 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AL049874.2-201ENST00000492636 288 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 AL512310.9-201ENST00000553311 948 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AL359219.2-201ENST00000555184 348 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXD13P35453 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 AC105254.2-201ENST00000603636 436 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AC018695.5-201ENST00000605872 315 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 MIR6826-201ENST00000617808 98 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 AC073869.10-201ENST00000642016 354 ntBASIC5.58□□□□□ -1.52
HOXD13P35453 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD13P35453 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD13P35453 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HOXD13P35453 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD13P35453 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXD13P35453 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXD13P35453 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXD13P35453 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 SNORA77-201ENST00000408716 125 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 RNU2-72P-201ENST00000411175 163 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 AC211486.3-201ENST00000412694 621 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AP000534.2-201ENST00000412729 568 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXD13P35453 COX6CP13-201ENST00000428703 226 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AC023141.6-201ENST00000429418 337 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXD13P35453 AL450023.3-201ENST00000440592 271 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 RN7SL443P-201ENST00000464331 290 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 RN7SL799P-201ENST00000475891 298 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 RN7SL441P-201ENST00000492388 296 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AC093763.2-201ENST00000505334 1223 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXD13P35453 RNU6-1308P-201ENST00000516817 103 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXD13P35453 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXD13P35453 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 AC009852.2-201ENST00000567898 485 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 AC011447.4-201ENST00000587562 111 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXD13P35453 AL049844.2-201ENST00000604280 628 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXD13P35453 AL645927.2-201ENST00000618350 349 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD13P35453 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD13P35453 AC133552.1-201ENST00000569988 4007 ntBASIC5.57□□□□□ -1.52
HOXD13P35453 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms