Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHMT2P34897 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 RN7SKP104-201ENST00000362605 328 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 RN7SKP95-201ENST00000362860 303 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 LRRC37BP1-201ENST00000398851 714 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AL109941.1-201ENST00000401925 229 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AL589994.1-201ENST00000404962 340 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.83□□□□□ -1.64
SHMT2P34897 AF186996.5-201ENST00000418098 904 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AC012519.1-201ENST00000424588 610 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 PSMD10P3-201ENST00000437000 448 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 AL591623.2-201ENST00000449978 222 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 RPL7P61-201ENST00000451721 751 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AL645937.3-201ENST00000453647 936 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 RNU6-943P-201ENST00000516960 98 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.83□□□□□ -1.64
SHMT2P34897 AP001922.4-201ENST00000526967 290 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.83□□□□□ -1.64
SHMT2P34897 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 PCNPP1-201ENST00000552501 511 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.83□□□□□ -1.64
SHMT2P34897 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.83□□□□□ -1.64
SHMT2P34897 AP005901.4-201ENST00000577336 569 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC005084.1-201ENST00000605160 304 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.83□□□□□ -1.64
SHMT2P34897 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.83□□□□□ -1.64
SHMT2P34897 AC074140.1-201ENST00000621617 208 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.83□□□□□ -1.64
SHMT2P34897 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.83□□□□□ -1.64
SHMT2P34897 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 MAPK10-263ENST00000641052 4307 ntBASIC4.83□□□□□ -1.64
SHMT2P34897 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
SHMT2P34897 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.83□□□□□ -1.64
SHMT2P34897 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHMT2P34897 AC011503.2-201ENST00000594230 1500 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 RPS26P4-201ENST00000431743 355 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AL450023.3-201ENST00000440592 271 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 SUMO2P1-206ENST00000445436 284 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.82□□□□□ -1.64
SHMT2P34897 MRPL35P2-201ENST00000448009 511 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.82□□□□□ -1.64
SHMT2P34897 HIGD1AP8-201ENST00000453927 274 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AL356981.1-201ENST00000454879 684 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 AC093890.1-201ENST00000502554 540 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.82□□□□□ -1.64
SHMT2P34897 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.82□□□□□ -1.64
SHMT2P34897 BTG4P1-201ENST00000510421 183 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AC110775.1-201ENST00000513721 462 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.82□□□□□ -1.64
SHMT2P34897 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 OR5AZ1P-201ENST00000527448 943 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AC005000.1-201ENST00000536192 288 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AC125612.1-201ENST00000547580 377 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AC084759.1-201ENST00000561168 290 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 MIR4443-201ENST00000585052 53 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AP001521.2-201ENST00000608772 546 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 BX323046.1-201ENST00000610145 535 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AF117829.2-201ENST00000619538 361 ntBASIC4.82□□□□□ -1.64
SHMT2P34897 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.82□□□□□ -1.64
SHMT2P34897 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.82□□□□□ -1.64
SHMT2P34897 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHMT2P34897 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.82□□□□□ -1.64
SHMT2P34897 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 BTBD10P1-201ENST00000549824 1352 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 SALL4P2-201ENST00000423288 2910 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 AL513548.1-201ENST00000562904 1724 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms