Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL8A1P27658 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL8A1P27658 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 AC020978.6-201ENST00000571197 3177 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 PHF2P2-202ENST00000444553 2865 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC073343.1-201ENST00000328239 651 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 RNU6-462P-201ENST00000362659 105 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 Y_RNA.148-201ENST00000363557 117 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 Y_RNA.187-201ENST00000363918 113 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 SET-203ENST00000372688 801 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL8A1P27658 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 RPL10P10-201ENST00000403509 664 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 RN7SKP59-201ENST00000410520 314 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC009413.1-201ENST00000414823 399 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 RPSAP60-201ENST00000415403 880 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 NDUFB4P5-201ENST00000415445 361 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 SPA17P1-201ENST00000416656 452 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 NENFP1-201ENST00000419476 466 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 FO393419.3-201ENST00000428741 282 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 NANOGP6-201ENST00000429190 847 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 FAM103A2P-201ENST00000444122 354 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 HIGD1AP8-201ENST00000453927 274 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 PPP1R2P5-201ENST00000457256 603 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 RN7SL70P-201ENST00000478322 302 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 TECRP2-201ENST00000503270 928 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 RPL7L1P13-201ENST00000511702 739 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC093303.1-201ENST00000514549 295 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 RNY4P37-201ENST00000516225 96 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 SNORD60.2-201ENST00000516883 86 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.41□□□□□ -1.38
COL8A1P27658 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 TOMM20P1-201ENST00000534518 427 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 SUB1P2-201ENST00000556401 297 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC090607.2-201ENST00000560331 695 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC016405.2-201ENST00000607393 312 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 7SK.12-201ENST00000612820 244 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 MIR8075-201ENST00000614354 80 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 AC006840.1-201ENST00000623069 542 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 NSRP1P1-201ENST00000444067 1693 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 AC090337.1-201ENST00000579651 2074 ntBASIC6.41□□□□□ -1.38
COL8A1P27658 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL8A1P27658 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
COL8A1P27658 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.41□□□□□ -1.38
COL8A1P27658 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.41□□□□□ -1.38
COL8A1P27658 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL8A1P27658 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms